RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 PTK6Q13882 451 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 ZNF713Q8N859 430 aaPredicted RBP15.28■□□□□ 0.04
PTPRA-201ENST00000216877 AGR3Q8TD06 166 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 IQCA1LA6NCM1 817 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 ITM2AO43736 263 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 KRT75O95678 551 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 DLDP09622 509 aaKnown RBP15.28■□□□□ 0.04
PTPRA-201ENST00000216877 NMT1P30419 496 aaKnown RBP15.28■□□□□ 0.04
PTPRA-201ENST00000216877 MAN1A1P33908 653 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 GCLMP48507 274 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 IKQ13123 557 aaPredicted RBP15.28■□□□□ 0.04
PTPRA-201ENST00000216877 COG2Q14746 738 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 CCDC153Q494R4 210 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 LLGL2Q6P1M3 1020 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 USP17L6PQ6QN14 398 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 RNF19BQ6ZMZ0 732 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 GLIS1Q8NBF1 620 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 PPP1R36Q96LQ0 422 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 CEP295NLQ96MC4 621 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 EBF4Q9BQW3 602 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 UVRAGQ9P2Y5 699 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 APEX2Q9UBZ4 518 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 ARHGAP26Q9UNA1 814 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 DNM3Q9UQ16 869 aa15.28■□□□□ 0.04
PTPRA-201ENST00000216877 KANSL1LA0AUZ9 987 aa15.27■□□□□ 0.04
PTPRA-201ENST00000216877 AIM2O14862 343 aa15.27■□□□□ 0.04
PTPRA-201ENST00000216877 SORBS3O60504 671 aa15.27■□□□□ 0.04
PTPRA-201ENST00000216877 IDO1P14902 403 aa15.27■□□□□ 0.04
PTPRA-201ENST00000216877 ANXA13P27216 316 aa15.27■□□□□ 0.04
PTPRA-201ENST00000216877 PPARGP37231 505 aaPredicted RBP15.27■□□□□ 0.04
PTPRA-201ENST00000216877 COPAP53621 1224 aa15.27■□□□□ 0.04
PTPRA-201ENST00000216877 LMNB2Q03252 620 aa15.27■□□□□ 0.04
PTPRA-201ENST00000216877 PPP4R3CPQ6ZMV5 832 aa15.27■□□□□ 0.04
PTPRA-201ENST00000216877 RNF111Q6ZNA4 994 aa15.27■□□□□ 0.04
PTPRA-201ENST00000216877 SENP6Q9GZR1 1112 aaPredicted RBP15.27■□□□□ 0.04
PTPRA-201ENST00000216877 TMEM117Q9H0C3 514 aa15.27■□□□□ 0.04
PTPRA-201ENST00000216877 GPAMQ9HCL2 828 aa15.27■□□□□ 0.04
PTPRA-201ENST00000216877 XPNPEP1Q9NQW7 623 aa15.27■□□□□ 0.04
PTPRA-201ENST00000216877 TAF1LQ8IZX4 1826 aa15.27■□□□□ 0.04
PTPRA-201ENST00000216877 A6NL46 340 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 TRIM64CA6NLI5 447 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 PIK3CDO00329 1044 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 DGKIO75912 1065 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 FGFR3P22607 806 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 C11orf63Q6NUN7 778 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 PTAR1Q7Z6K3 402 aaPredicted RBP15.27■□□□□ 0.03
PTPRA-201ENST00000216877 ERI1Q8IV48 349 aaKnown RBP15.27■□□□□ 0.03
PTPRA-201ENST00000216877 TTC13Q8NBP0 860 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 ERMNQ8TAM6 284 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 EME1Q96AY2 570 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 ISCA1Q9BUE6 129 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 SEMA6AQ9H2E6 1030 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 KCNK13Q9HB14 408 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 MAD2L2Q9UI95 211 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 CCPG1Q9ULG6 757 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 PRELID1Q9Y255 219 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 LY75O60449 1722 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 TYROBPO43914 113 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 DNAJA2O60884 412 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 FUCA1P04066 466 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 AKR1B1P15121 316 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 JAM2P57087 298 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 PSMC6P62333 389 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 BST1Q10588 318 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 KIAA2013Q8IYS2 634 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 GRIN3AQ8TCU5 1115 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 ACSF2Q96CM8 615 aaPredicted RBP15.27■□□□□ 0.03
PTPRA-201ENST00000216877 REEP2Q9BRK0 252 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 HERPUD2Q9BSE4 406 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 SPO11Q9Y5K1 396 aa15.27■□□□□ 0.03
PTPRA-201ENST00000216877 MYH3P11055 1940 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 FRMPD4Q14CM0 1322 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 CYB561D2O14569 222 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 TP73O15350 636 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 KLHL41O60662 606 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 CNOT3O75175 753 aaKnown RBP15.26■□□□□ 0.03
PTPRA-201ENST00000216877 IVDP26440 423 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 HMOX2P30519 316 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 NR1D2Q14995 579 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 TPTE2Q6XPS3 522 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 ZNF512Q96ME7 567 aaPredicted RBP15.26■□□□□ 0.03
PTPRA-201ENST00000216877 VPS11Q9H270 941 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 TPK1Q9H3S4 243 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 GID8Q9NWU2 228 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 DDX56Q9NY93 547 aaKnown RBP15.26■□□□□ 0.03
PTPRA-201ENST00000216877 APOBEC2Q9Y235 224 aaKnown RBP15.26■□□□□ 0.03
PTPRA-201ENST00000216877 ITM2BQ9Y287 266 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 BIRC5O15392 142 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 PDE8AO60658 829 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 MYBPC1Q00872 1141 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 AAGABQ6PD74 315 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 CAPSLQ8WWF8 208 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 E2F7Q96AV8 911 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 TMEM47Q9BQJ4 181 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 DCP1AQ9NPI6 582 aaPredicted RBP15.26■□□□□ 0.03
PTPRA-201ENST00000216877 TCEA3O75764 348 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 CCDC130P13994 396 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 TCEA1P23193 301 aaKnown RBP15.26■□□□□ 0.03
PTPRA-201ENST00000216877 BFSP1Q12934 665 aa15.26■□□□□ 0.03
PTPRA-201ENST00000216877 PTK7Q13308 1070 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms