RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 RAB30Q15771 203 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 TBC1D1Q86TI0 1168 aaPredicted RBP14.32□□□□□ -0.12
SIX4-201ENST00000216513 PPM1NQ8N819 430 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 TMEM176AQ96HP8 235 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 UROC1Q96N76 676 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 FMO2Q99518 471 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 DMAP1Q9NPF5 467 aaPredicted RBP14.32□□□□□ -0.12
SIX4-201ENST00000216513 IQANK1A0A1B0GTG1 560 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 NCAM2O15394 837 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 STX7O15400 261 aaKnown RBP14.32□□□□□ -0.12
SIX4-201ENST00000216513 ZW10O43264 779 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 C21orf59P57076 290 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 PHEXP78562 749 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 DPYDQ12882 1025 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 NT5DC4Q86YG4 428 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 IL31RAQ8NI17 732 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 CXorf38Q8TB03 319 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 RHOBTB3O94955 611 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 ZNF200P98182 395 aaPredicted RBP14.32□□□□□ -0.12
SIX4-201ENST00000216513 SLC45A4Q5BKX6 768 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 ERAP2Q6P179 960 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 LGI2Q8N0V4 545 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 RIPOR3Q96MK2 946 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 WDR24Q96S15 920 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 FBXL5Q9UKA1 691 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 SPECC1L-ADORA2AF8WAN1 911 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 ATP5BP06576 529 aaKnown RBP14.32□□□□□ -0.12
SIX4-201ENST00000216513 CCDC130P13994 396 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 SMPD1P17405 629 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 NDST1P52848 882 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 BEND6Q5SZJ8 279 aaPredicted RBP14.32□□□□□ -0.12
SIX4-201ENST00000216513 SRRM1Q8IYB3 904 aaKnown RBP14.32□□□□□ -0.12
SIX4-201ENST00000216513 SNX31Q8N9S9 440 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 GPR152Q8TDT2 470 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 AGPAT5Q9NUQ2 364 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 TTI1O43156 1089 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 SLITRK3O94933 977 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 GLUD2P49448 558 aa14.32□□□□□ -0.12
SIX4-201ENST00000216513 TSEN34Q9BSV6 310 aaKnown RBP14.32□□□□□ -0.12
SIX4-201ENST00000216513 KRT14P02533 472 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 UCHL3P15374 230 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 OR1D2P34982 312 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 ADIGQ0VDE8 80 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 LBX2Q6XYB7 198 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 LRGUKQ96M69 825 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 ELOVL4Q9GZR5 314 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 MAN1C1Q9NR34 630 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 MID2Q9UJV3 735 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 GNGT2O14610 69 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 CTDNEP1O95476 244 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 THOP1P52888 689 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 C1QTNF8P60827 252 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 IL9RQ01113 521 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 PHKG1Q16816 387 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 FASTKD1Q53R41 847 aaKnown RBP14.31□□□□□ -0.12
SIX4-201ENST00000216513 WSCD1Q658N2 575 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 NUGGCQ68CJ6 796 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 ILDR2Q71H61 639 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 ING5Q8WYH8 240 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 BTBD6Q96KE9 485 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 RASGRF2O14827 1237 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
SIX4-201ENST00000216513 FBXO21O94952 628 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 HSPA4LO95757 839 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 APRTP07741 180 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 ACLYP53396 1101 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 CYP24A1Q07973 514 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 BST2Q10589 180 aaKnown RBP14.31□□□□□ -0.12
SIX4-201ENST00000216513 PDK1Q15118 436 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 SDHAF4Q5VUM1 108 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 SYNPO2Q9UMS6 1093 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 SLIT2O94813 1529 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 CHRM3P20309 590 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 EPHB4P54760 987 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 ACOX1Q15067 660 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 TBCCQ15814 346 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 DBN1Q16643 649 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 EDRF1Q3B7T1 1238 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 SERPINA13PQ6UXR4 307 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 ZNF784Q8NCA9 323 aaPredicted RBP14.31□□□□□ -0.12
SIX4-201ENST00000216513 RFWD2Q8NHY2 731 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 ARL8AQ96BM9 186 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 PANX2Q96RD6 677 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 WNT8AQ9H1J5 351 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.31□□□□□ -0.12
SIX4-201ENST00000216513 ZNF263O14978 683 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 LGR5O75473 907 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 ERVK-10P10266 1014 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 EVX2Q03828 476 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 PRR23BQ6ZRT6 265 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 CHPFQ8IZ52 775 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 DNAJC7Q99615 494 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 ZNF536O15090 1300 aa14.31□□□□□ -0.12
SIX4-201ENST00000216513 FMN2Q9NZ56 1722 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 FGFR1P11362 822 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 NAT16Q8N8M0 369 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 USP38Q8NB14 1042 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 CCDC197Q8NCU1 140 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 OR2W6PQ8NHA6 318 aa14.3□□□□□ -0.12
SIX4-201ENST00000216513 UBXN6Q9BZV1 441 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms