RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 TRMT6Q9UJA5 497 aaKnown RBP13.01□□□□□ -0.33
LMCD1-201ENST00000157600 CHMP2BQ9UQN3 213 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 ITM2BQ9Y287 266 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 SLC4A7Q9Y6M7 1214 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 GOLGA8RI6L899 631 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 ATXN7L3BQ96GX2 97 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 C17orf80Q9BSJ5 609 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 LRRC40Q9H9A6 602 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 KLHL11Q9NVR0 708 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 MOSPD1Q9UJG1 213 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 PRRG1O14668 218 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 RANBP1P43487 201 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 MYL6P60660 151 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 GOLGA7BQ2TAP0 167 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 EFCAB12Q6NXP0 572 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 ZDHHC15Q96MV8 337 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 NPHP3-ACAD11A0A0J9YXS1 232 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 ADCY3O60266 1144 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 TDRD10Q5VZ19 366 aaKnown RBP13.01□□□□□ -0.33
LMCD1-201ENST00000157600 PRR5LQ6MZQ0 368 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 VPS50Q96JG6 964 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 B2RBV5 119 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 VDRP11473 427 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 LHX1P48742 406 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 VCPP55072 806 aaKnown RBP13.01□□□□□ -0.33
LMCD1-201ENST00000157600 OXCT1P55809 520 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 ACTN3Q08043 901 aaPredicted RBP13.01□□□□□ -0.33
LMCD1-201ENST00000157600 ZFP1Q6P2D0 407 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 CNBD2Q96M20 576 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 CINPQ9BW66 212 aaPredicted RBP13.01□□□□□ -0.33
LMCD1-201ENST00000157600 ADGRE3Q9BY15 652 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 UBXN6Q9BZV1 441 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 POLE3Q9NRF9 147 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 VWA5AO00534 786 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 VPS26AO75436 327 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 VCLP18206 1134 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 ANTXR2P58335 489 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
LMCD1-201ENST00000157600 CLEC16AQ2KHT3 1053 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 IL31Q6EBC2 164 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 DNERQ8NFT8 737 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 KCNV2Q8TDN2 545 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 SLC16A10Q8TF71 515 aa13.01□□□□□ -0.33
LMCD1-201ENST00000157600 CRTAMO95727 393 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 CYP11B1P15538 503 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 PCBP1Q15365 356 aaKnown RBP eCLIP13□□□□□ -0.33
LMCD1-201ENST00000157600 CCNG2Q16589 344 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 SEL1L3Q68CR1 1132 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 WDR49Q8IV35 697 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 CCT7Q99832 543 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 WDCPQ9H6R7 721 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 ZNF70Q9UC06 446 aaPredicted RBP13□□□□□ -0.33
LMCD1-201ENST00000157600 HPS5Q9UPZ3 1129 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 KLRC1P26715 233 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 RXFP1Q9HBX9 757 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 ITGA11Q9UKX5 1188 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 RPS6KL1Q9Y6S9 549 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 ARHGAP23Q9P227 1491 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 PDE4DIPQ5VU43 2346 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 PHF20L1A8MW92 1017 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 CHI3L2Q15782 390 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 ASB2Q96Q27 587 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 CEP44Q9C0F1 390 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 ZFYVE28Q9HCC9 887 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 CTNNAL1Q9UBT7 734 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 F8VZ95 297 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 SDE2Q6IQ49 451 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 C9orf72Q96LT7 481 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 VTI1BQ9UEU0 232 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 CLCA2Q9UQC9 943 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 SAC3D1A6NKF1 404 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 GPR182O15218 404 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 VPS4BO75351 444 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 NTSR2O95665 410 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 STAG3L1P0CL83 205 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 CNTN1Q12860 1018 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 CYTH1Q15438 398 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 PCNX4Q63HM2 1172 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 NIPA1Q7RTP0 329 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 NUP93Q8N1F7 819 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 ANKRD6Q9Y2G4 727 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 SPEF2Q9C093 1822 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 ANKRD13AQ8IZ07 590 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 C4orf33Q8N1A6 199 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 C19orf60Q96EN9 201 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 AGAP3Q96P47 875 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 DPP3Q9NY33 737 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 SERPINI2O75830 405 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 SLC9A1P19634 815 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 GCLCP48506 637 aaPredicted RBP13□□□□□ -0.33
LMCD1-201ENST00000157600 TTC33Q6PID6 262 aaPredicted RBP13□□□□□ -0.33
LMCD1-201ENST00000157600 SNX31Q8N9S9 440 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 DPF2Q92785 391 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 SYTL2Q9HCH5 934 aa13□□□□□ -0.33
LMCD1-201ENST00000157600 AFF4Q9UHB7 1163 aaKnown RBP13□□□□□ -0.33
LMCD1-201ENST00000157600 LTN1O94822 1766 aa12.99□□□□□ -0.33
LMCD1-201ENST00000157600 GON4LQ3T8J9 2241 aa12.99□□□□□ -0.33
LMCD1-201ENST00000157600 EIF2S1P05198 315 aaKnown RBP12.99□□□□□ -0.33
LMCD1-201ENST00000157600 KRT20P35900 424 aa12.99□□□□□ -0.33
LMCD1-201ENST00000157600 ASCC2Q9H1I8 757 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms