RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 SF3B1O75533 1304 aaKnown RBP eCLIP11.87□□□□□ -0.51
PKP2-201ENST00000070846 AP3B1O00203 1094 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 ZNF189O75820 626 aaPredicted RBP11.86□□□□□ -0.51
PKP2-201ENST00000070846 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.86□□□□□ -0.51
PKP2-201ENST00000070846 PPTC7Q8NI37 304 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 ZNF669Q96BR6 464 aaPredicted RBP11.86□□□□□ -0.51
PKP2-201ENST00000070846 CYTH2Q99418 400 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 HSD17B14Q9BPX1 270 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 CENPKQ9BS16 269 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 ARHGEF38Q9NXL2 777 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.86□□□□□ -0.51
PKP2-201ENST00000070846 MRPS23Q9Y3D9 190 aaKnown RBP11.86□□□□□ -0.51
PKP2-201ENST00000070846 NFAT5O94916 1531 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 GPR25O00155 361 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 CHRM3P20309 590 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 CASP5P51878 434 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 RHOAP61586 193 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 IFT88Q13099 833 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 ART3Q13508 389 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 COL9A3Q14050 684 aaPredicted RBP11.86□□□□□ -0.51
PKP2-201ENST00000070846 NT5DC4Q86YG4 428 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 SYN2Q92777 582 aaPredicted RBP11.86□□□□□ -0.51
PKP2-201ENST00000070846 SDCCAG3Q96C92 435 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 LRRC1Q9BTT6 524 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 MFSD1Q9H3U5 465 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 DNAJC18Q9H819 358 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 FAM105AQ9NUU6 356 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 XPO7Q9UIA9 1087 aaKnown RBP11.86□□□□□ -0.51
PKP2-201ENST00000070846 AP4E1Q9UPM8 1137 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 SYNDIG1LA6NDD5 238 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 PSMD3O43242 534 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 TBX4P57082 545 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 USP10Q14694 798 aaKnown RBP11.86□□□□□ -0.51
PKP2-201ENST00000070846 NFIL3Q16649 462 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 ZSCAN26Q16670 478 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 UGCGQ16739 394 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 UGP2Q16851 508 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 NAPEPLDQ6IQ20 393 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 RETSATQ6NUM9 610 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 EPM2AIP1Q7L775 607 aaPredicted RBP11.86□□□□□ -0.51
PKP2-201ENST00000070846 ABRAQ8N0Z2 381 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 KRT35Q92764 455 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 APOL2Q9BQE5 337 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 PITPNM3Q9BZ71 974 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 RBPJLQ9UBG7 517 aa11.86□□□□□ -0.51
PKP2-201ENST00000070846 CCDC195A0A1B0GUA6 201 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 GNGT2O14610 69 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 GZMAP12544 262 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 IFNL1Q8IU54 200 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 TMEM161BQ8NDZ6 487 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 GPR20Q99678 358 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 CNOT10Q9H9A5 744 aaKnown RBP11.85□□□□□ -0.51
PKP2-201ENST00000070846 C20orf96Q9NUD7 363 aaPredicted RBP11.85□□□□□ -0.51
PKP2-201ENST00000070846 NEU2Q9Y3R4 380 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 MYOM1P52179 1685 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 TMEM247A6NEH6 219 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 NFICP08651 508 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 ARF4P18085 180 aaPredicted RBP11.85□□□□□ -0.51
PKP2-201ENST00000070846 SCNN1BP51168 640 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 TFB1MQ8WVM0 346 aaKnown RBP11.85□□□□□ -0.51
PKP2-201ENST00000070846 TMA16Q96EY4 203 aaKnown RBP11.85□□□□□ -0.51
PKP2-201ENST00000070846 TRAIPQ9BWF2 469 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 TMEM134Q9H6X4 195 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 PPARGC1AQ9UBK2 798 aaKnown RBP11.85□□□□□ -0.51
PKP2-201ENST00000070846 FBXL5Q9UKA1 691 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 SLIT3O75094 1523 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 ATRNO75882 1429 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 PPP1R11O60927 126 aaPredicted RBP11.85□□□□□ -0.51
PKP2-201ENST00000070846 MMP3P08254 477 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 KITP10721 976 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 NDUFV1P49821 464 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 SESN3P58005 492 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 PTK2BQ14289 1009 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 UNC45BQ8IWX7 931 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 C7orf61Q8IZ16 206 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 ERLEC1Q96DZ1 483 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 CORO1BQ9BR76 489 aa11.85□□□□□ -0.51
PKP2-201ENST00000070846 CYP3A7-CYP3A51PA0A087WV96 503 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 A0A0G2JLL6 359 aaPredicted RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 GSTA4O15217 222 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 KCNA2P16389 499 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 CYP3A7P24462 503 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 MAGOHP61326 146 aaKnown RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 PABPC1LQ4VXU2 614 aaKnown RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 CCDC38Q502W7 563 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 DENND5BQ6ZUT9 1274 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 PRRT2Q7Z6L0 340 aaPredicted RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 NUDCD3Q8IVD9 361 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 CELF6Q96J87 481 aaKnown RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 YIPF2Q9BWQ6 316 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 CERS4Q9HA82 394 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 CASS4Q9NQ75 786 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 ANXA9O76027 345 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 TMCC1O94876 653 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 PCDH8O95206 1070 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 CCNE2O96020 404 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 ADH1AP07327 375 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 CCDC130P13994 396 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 NAA25Q14CX7 972 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 PACSIN1Q9BY11 444 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms