RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 CRCPO75575 148 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 CFHP08603 1231 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 ESRRAP11474 423 aaPredicted RBP12.61□□□□□ -0.39
CHPF2-201ENST00000035307 HSPA9P38646 679 aaKnown RBP12.61□□□□□ -0.39
CHPF2-201ENST00000035307 PBX3P40426 434 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 WNT7BP56706 349 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 KCNA10Q16322 511 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 BRSK2Q8IWQ3 736 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 NDRG1Q92597 394 aaKnown RBP12.61□□□□□ -0.39
CHPF2-201ENST00000035307 N4BP2L2Q92802 583 aaPredicted RBP12.61□□□□□ -0.39
CHPF2-201ENST00000035307 NT5C1AQ9BXI3 368 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 CYP4F11Q9HBI6 524 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 PSD3Q9NYI0 1048 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 TUBGCP4Q9UGJ1 667 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 XPO7Q9UIA9 1087 aaKnown RBP12.61□□□□□ -0.39
CHPF2-201ENST00000035307 STRIP2Q9ULQ0 834 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 MYH7BA7E2Y1 1941 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 DCDC2CA8MYV0 355 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 CDH16O75309 829 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 BANF1O75531 89 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 SRGAP2BP0DMP2 458 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 ZBTB48P10074 688 aaPredicted RBP12.61□□□□□ -0.39
CHPF2-201ENST00000035307 SERPINB6P35237 376 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 TFDP2Q14188 446 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 MFSD7Q6UXD7 560 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 RASAL3Q86YV0 1011 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 ERP27Q96DN0 273 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 LRRC37BQ96QE4 947 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 PCDHB18PQ96TA0 734 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 KLC2Q9H0B6 622 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 NEUROG2Q9H2A3 272 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 IFT122Q9HBG6 1241 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 LPXNO60711 386 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 CCDC130P13994 396 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 SLC26A2P50443 739 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 EPHB1P54762 984 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 RPL7AP62424 266 aaKnown RBP12.61□□□□□ -0.39
CHPF2-201ENST00000035307 OTUD4Q01804 1114 aaKnown RBP12.61□□□□□ -0.39
CHPF2-201ENST00000035307 DCAF6Q58WW2 860 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 PID1Q7Z2X4 250 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 ACTL9Q8TC94 416 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 DTX3LQ8TDB6 740 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 ARHGAP28Q9P2N2 729 aa12.61□□□□□ -0.39
CHPF2-201ENST00000035307 COL11A2P13942 1736 aaPredicted RBP12.61□□□□□ -0.39
CHPF2-201ENST00000035307 MYADML2A6NDP7 307 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 PPFIA2O75334 1257 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 CCND3P30281 292 aaPredicted RBP12.6□□□□□ -0.39
CHPF2-201ENST00000035307 ARHGEF6Q15052 776 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 ICE2Q659A1 982 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 HEATR6Q6AI08 1181 aaKnown RBP12.6□□□□□ -0.39
CHPF2-201ENST00000035307 TRIM72Q6ZMU5 477 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 SPATA21Q7Z572 469 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 RNF135Q8IUD6 432 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 MCOLN2Q8IZK6 566 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 ZNF516Q92618 1163 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 APBA2Q99767 749 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 TRPV6Q9H1D0 765 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 KLC4Q9NSK0 619 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.6□□□□□ -0.39
CHPF2-201ENST00000035307 A0A0B4J269 797 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 TADA2AO75478 443 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 PDHA1P08559 390 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 ITIH2P19823 946 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 CORO7P57737 925 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 PPTC7Q8NI37 304 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 MS4A4AQ96JQ5 239 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 ST3GAL5Q9UNP4 418 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 ZMYM2Q9UBW7 1377 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 CENPFP49454 3210 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 WNK3Q9BYP7 1800 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 GTPBP10A4D1E9 387 aaKnown RBP12.6□□□□□ -0.39
CHPF2-201ENST00000035307 CYB561D2O14569 222 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 AGTP01019 485 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 HNRNPH3P31942 346 aaKnown RBP12.6□□□□□ -0.39
CHPF2-201ENST00000035307 ATXN3P54252 364 aaPredicted RBP12.6□□□□□ -0.39
CHPF2-201ENST00000035307 FKBP1BP68106 108 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 SDHAF4Q5VUM1 108 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 ECM29Q5VYK3 1845 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 SCARA3Q6AZY7 606 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 PRELID2Q8N945 189 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 ATP11CQ8NB49 1132 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 EDEM1Q92611 657 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 MTG1Q9BT17 334 aaPredicted RBP12.6□□□□□ -0.39
CHPF2-201ENST00000035307 UBN1Q9NPG3 1134 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 FLRT1Q9NZU1 646 aa12.6□□□□□ -0.39
CHPF2-201ENST00000035307 PTPRJQ12913 1337 aa12.59□□□□□ -0.39
CHPF2-201ENST00000035307 CLDN5O00501 218 aa12.59□□□□□ -0.39
CHPF2-201ENST00000035307 LYPLA2O95372 231 aa12.59□□□□□ -0.39
CHPF2-201ENST00000035307 MYBL1P10243 752 aa12.59□□□□□ -0.39
CHPF2-201ENST00000035307 CTCFP49711 727 aaPredicted RBP12.59□□□□□ -0.39
CHPF2-201ENST00000035307 KDSRQ06136 332 aa12.59□□□□□ -0.39
CHPF2-201ENST00000035307 CLEC16AQ2KHT3 1053 aa12.59□□□□□ -0.39
CHPF2-201ENST00000035307 TSNAXIP1Q2TAA8 658 aa12.59□□□□□ -0.39
CHPF2-201ENST00000035307 C11orf63Q6NUN7 778 aa12.59□□□□□ -0.39
CHPF2-201ENST00000035307 KDM7AQ6ZMT4 941 aa12.59□□□□□ -0.39
CHPF2-201ENST00000035307 TMC2Q8TDI7 906 aa12.59□□□□□ -0.39
CHPF2-201ENST00000035307 APOL2Q9BQE5 337 aa12.59□□□□□ -0.39
CHPF2-201ENST00000035307 HMX1Q9NP08 348 aaPredicted RBP12.59□□□□□ -0.39
CHPF2-201ENST00000035307 DNPEPQ9ULA0 475 aa12.59□□□□□ -0.39
CHPF2-201ENST00000035307 MAPK13O15264 365 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms