RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Chmp2aQ9DB34 222 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Rassf7Q9DD19 359 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Lztfl1Q9JHQ5 299 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Psmg1Q9JK23 289 aa9.15□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cyp2t4E9PWV0 503 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gpr25P0C5I1 358 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Nr2c2P49117 596 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Stmn1P54227 149 aaKnown RBP9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gp1bbP56400 206 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Abi2P62484 446 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 RalaP63321 206 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 YwhahP68510 246 aaKnown RBP9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 MylpfP97457 169 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 ArvcfP98203 962 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Pik3r6Q3U6Q4 756 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Fez2Q6TYB5 348 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Aste1Q8BIR2 672 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Mageb18Q8BQR7 327 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 PisdQ8BSF4 406 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Slfn5Q8CBA2 884 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Rem2Q8VEL9 341 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Dr1Q91WV0 176 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Acbd6Q9D061 282 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 ParvaQ9EPC1 372 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Zranb2Q9R020 330 aaKnown RBP9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Peg12Q9WVA7 283 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Apol7bB1AQP7 369 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Lipo2D3YY49 398 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Olfr731F8VQB9 326 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Adam19O35674 920 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cd72P21855 354 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Marcksl1P28667 200 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Slc1a1P51906 523 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Apol7eQ3UZ24 369 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gm11487Q5RIS0 354 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Papss1Q60967 624 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cpa4Q6P8K8 420 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Naa15Q80UM3 865 aaKnown RBP9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 LarsQ8BMJ2 1178 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ppm1kQ8BXN7 372 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ccdc137Q8R0K4 290 aaKnown RBP9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Lpin3Q99PI4 848 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Arl2bpQ9D385 163 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Spatc1lQ9D9W0 342 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Rab13Q9DD03 202 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Scyl1Q9EQC5 806 aaKnown RBP9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Caln1Q9JJG7 219 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Adamts9E9PUN6 1931 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 PcntP48725 2898 aa9.14□□□□□ -0.95
Trim39-201ENSMUST00000042717 Fam43bA2AM80 330 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gm13212B1ASQ7 799 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Scgb2b7D3YYY1 112 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ctnnal1O88327 731 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Art2aP17981 287 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Nrp1P97333 923 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Nsun2Q1HFZ0 757 aaKnown RBP9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 9130409I23RikQ3TS87 320 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cyp2c66Q5GLZ0 490 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 RadilQ69Z89 1099 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ccdc25Q78PG9 208 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Trim6Q8BGE7 488 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Wdr35Q8BND3 1181 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Anapc5Q8BTZ4 740 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Wdr27Q8C5V5 780 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Uba6Q8C7R4 1053 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ftsj1Q8CBC7 324 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Actl9Q8CG27 415 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Mmgt1Q8K273 131 aaKnown RBP9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Lgi2Q8K4Z0 550 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Zcchc14Q8VIG0 956 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Dpp3Q99KK7 738 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 NamptQ99KQ4 491 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Q9CQC3 228 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Fam212aQ9CX62 282 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Vps33aQ9D2N9 598 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Scnn1bQ9WU38 638 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Myo16Q5DU14 1919 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gm45861A0A1B0GRY3 1923 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Nlrc5C3VPR6 1915 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gm5483B2RV77 97 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gm10717D3Z1I8 228 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cdc6O89033 562 aaKnown RBP9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Hsd17b1P51656 344 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Fam172aQ3TNH5 417 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 PighQ5M9N4 188 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Mvb12bQ6KAU4 317 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gpt2Q8BGT5 522 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Nipal1Q8BMW7 416 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Prrg2Q8R182 198 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Wdr98Q8VC42 657 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cd300ldQ8VCH2 221 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Mcrs1Q99L90 462 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Slc25a11Q9CR62 314 aaKnown RBP9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 PlekQ9JHK5 350 aaKnown RBP9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cpxm1Q9Z100 722 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Arhgef10Q8C033 1345 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gm5485A0A1D5RM98 91 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Dsg3O35902 993 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cldn5O54942 218 aa9.13□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gja8P28236 440 aa9.13□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms