RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 IqceQ6PCQ0 778 aa8.84□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Foxo6Q70KY4 559 aa8.84□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Eif4bQ8BGD9 611 aaKnown RBP8.84□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Creb3l2Q8BH52 521 aa8.84□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Chmp2bQ8BJF9 213 aa8.84□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Serpina3bQ8BYY9 420 aa8.84□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Tm9sf1Q9DBU0 606 aa8.84□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Pold3Q9EQ28 462 aa8.84□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Cops5O35864 334 aa8.84□□□□□ -1
Sf3b1-201ENSMUST00000027127 Krt10P02535 570 aa8.84□□□□□ -1
Sf3b1-201ENSMUST00000027127 Mcpt4P21812 246 aa8.84□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ica1lQ3TY65 431 aa8.84□□□□□ -1
Sf3b1-201ENSMUST00000027127 Hif1aQ61221 836 aaKnown RBP8.84□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ntan1Q64311 310 aa8.84□□□□□ -1
Sf3b1-201ENSMUST00000027127 Stambpl1Q76N33 436 aa8.84□□□□□ -1
Sf3b1-201ENSMUST00000027127 Haus3Q8QZX2 570 aa8.84□□□□□ -1
Sf3b1-201ENSMUST00000027127 Slf1Q8R3P9 1054 aa8.84□□□□□ -1
Sf3b1-201ENSMUST00000027127 AvenQ9D9K3 342 aa8.84□□□□□ -1
Sf3b1-201ENSMUST00000027127 Spag6Q9JLI7 507 aa8.84□□□□□ -1
Sf3b1-201ENSMUST00000027127 Gipc1Q9Z0G0 333 aa8.84□□□□□ -1
Sf3b1-201ENSMUST00000027127 Adamtsl1Q8BLI0 1745 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Siah3B2RWG3 268 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Znf112Q0VAW7 879 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Tfap2bQ61313 459 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Srd5a1Q68FF9 255 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Tcaf3Q6QR59 914 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 NostrinQ6WKZ7 506 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Camkk2Q8C078 588 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Arfip2Q8K221 341 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Pcdha11Q91Y19 950 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Mapk13Q9Z1B7 366 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Tnip3A0A1D5RMN0 279 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ptpn3A2ALK8 913 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 PostnQ62009 838 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Skiv2lQ6NZR5 1244 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Rps6ka6Q7TPS0 764 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Sbk1Q8QZX0 417 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Trps1Q925H1 1281 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Mccc1Q99MR8 717 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Tpgs1Q99MS8 303 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Zfy2P20662 777 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 AmhP27106 555 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Tulp2P46686 562 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Anxa5P48036 319 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Pkn1P70268 946 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Gpr156Q6PCP7 798 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Tmem260Q8BMD6 703 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Clasp2Q8BRT1 1286 aaKnown RBP8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 HgsQ99LI8 775 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Cttnbp2nlQ99LJ0 638 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Nt5c3aQ9D020 331 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 DtnaQ9D2N4 746 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Tex9Q9D845 387 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 ParvbQ9ES46 365 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Slc13a1Q9JHI4 594 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 PigoQ9JJI6 1093 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 B4galt5Q9JMK0 388 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Hcn2O88703 863 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 VegfaQ00731 214 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Pi4k2aQ2TBE6 479 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ccdc33Q3ULW6 985 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Wdr18Q4VBE8 431 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Xlr3bQ6P205 226 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ttyh3Q6P5F7 524 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Phf8Q80TJ7 1023 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Slc9a4Q8BUE1 797 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Mrpl58Q8R035 206 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Pcdha5Q91Y15 934 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Pkp2Q9CQ73 795 aaKnown RBP8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 CacybpQ9CXW3 229 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Iigp1Q9QZ85 413 aa8.83□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ifi206G3UZV2 921 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Tnfrsf11bO08712 401 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Hsd17b2P51658 381 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Lipo3Q3UT41 399 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ptk6Q64434 451 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 FAM120AQ6A0A9 1112 aaKnown RBP8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Actr5Q80US4 605 aaKnown RBP8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Bmp15Q9Z0L4 392 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Btaf1E9QAE3 1848 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Art2bO35975 289 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 ThbdP15306 577 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Rhox5P52651 210 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Oaz1P54369 227 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Cdh8P97291 799 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 NogP97466 232 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Tmem237Q3V0J1 427 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Mkrn3Q60764 544 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Q6GQV0 436 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Nipal1Q8BMW7 416 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Dus1lQ8C2P3 475 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Slc12a6Q924N4 1150 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Dis3Q9CSH3 958 aaKnown RBP8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ms4a14A0A087WSD2 1232 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Vmn2r39L7N2E5 861 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Nedd9O35177 833 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Itgb3O54890 787 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Psma2P49722 234 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Slc38a5Q3U1J0 479 aa8.82□□□□□ -1
Sf3b1-201ENSMUST00000027127 Luc7l3Q5SUF2 432 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms