RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Slc22a3Q9WTW5 551 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Trip6Q9Z1Y4 480 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Zfp984A2A7A2 547 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ism1A2ATD1 454 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 G430095P16RikE9Q913 147 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Orm2P07361 207 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Nedd1P33215 660 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Slc2a13Q3UHK1 637 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 BC051142Q3V0M8 400 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Syce2Q505B8 171 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Rgl2Q61193 778 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Q6DFW0 481 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Krt72Q6IME9 520 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ms4a5Q810P8 197 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Tmed10Q9D1D4 219 aaKnown RBP11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Rabl3Q9D4V7 236 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Tbx18Q9EPZ6 613 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Tcf12Q61286 706 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 FdxrQ61578 494 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Mapk4Q6P5G0 583 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 TbataQ7TSD4 393 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Reep2Q8VCD6 254 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Tubgcp4Q9D4F8 667 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Mrpl4Q9DCU6 294 aaKnown RBP11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Bcl10Q9Z0H7 233 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 CrnnD3YUU6 520 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 P01734 135 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Rab17P35292 214 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 PolgP54099 1218 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ephb2P54763 986 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 NfiaQ02780 532 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Sdr16c6Q05A13 316 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Slc24a2Q14BI1 711 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Plekhm3Q8BM47 761 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Amz1Q8BVF9 502 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Kbtbd13Q8C828 458 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Abcf3Q8K268 709 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ces4aQ8R0W5 563 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Hspbp1Q99P31 357 aaKnown RBP11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Timm50Q9D880 353 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Atp13a1Q9EPE9 1200 aaKnown RBP11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Pi16Q9ET66 489 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Spag6Q9JLI7 507 aa11.22□□□□□ -0.61
Ciita-201ENSMUST00000023147 Mup6A2AV72 179 aa11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 Vmn2r5K7N788 911 aa11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 Npas2P97460 816 aa11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 UvragQ8K245 698 aa11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 Atp6v1b1Q91YH6 513 aa11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ubxn6Q99PL6 442 aa11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 Eif3eP60229 445 aaKnown RBP11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 Naif1Q6PFD7 327 aa11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 Suz12Q80U70 741 aaKnown RBP11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 NrcamQ810U4 1256 aa11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 Adgra1Q8C4G9 578 aa11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 Pkn3Q8K045 878 aa11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 Smyd2Q8R5A0 433 aa11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 Pcdhga4Q91XY4 930 aa11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 Trim33Q99PP7 1142 aa11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 Ddx21Q9JIK5 851 aaKnown RBP11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 CtsfQ9R013 462 aa11.21□□□□□ -0.61
Ciita-201ENSMUST00000023147 Dhx35A2ACQ1 703 aaKnown RBP11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Olfr1354E9Q5G9 310 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Zc3h7bF8VPP8 982 aaKnown RBP11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Clk2O35491 499 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Psma2P49722 234 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Als2clQ60I26 952 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Klhl2Q8JZP3 593 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 ClyblQ8R4N0 338 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 ChiaQ91XA9 473 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Hspa12bQ9CZJ2 685 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Bcs1lQ9CZP5 418 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Stk4Q9JI11 487 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Uts2Q9QZQ3 123 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Slfn8B1ARD8 910 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Hmgxb3G3X9M3 1254 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Hcn2O88703 863 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Klrb1Q0ZUP1 214 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 XiapQ60989 496 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Usp20Q8C6M1 916 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Gpc5Q8CAL5 572 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Olfr397Q8VEZ6 315 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 MydgfQ9CPT4 166 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Smyd3Q9CWR2 428 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Ten1Q9D7K2 161 aa11.21□□□□□ -0.62
Ciita-201ENSMUST00000023147 Srp72F8VQC1 671 aa11.2□□□□□ -0.62
Ciita-201ENSMUST00000023147 ChrngP04760 519 aa11.2□□□□□ -0.62
Ciita-201ENSMUST00000023147 L1camP11627 1260 aa11.2□□□□□ -0.62
Ciita-201ENSMUST00000023147 Mbl1P39039 239 aa11.2□□□□□ -0.62
Ciita-201ENSMUST00000023147 Slc11a2P49282 568 aa11.2□□□□□ -0.62
Ciita-201ENSMUST00000023147 Tmem26Q3UP23 366 aa11.2□□□□□ -0.62
Ciita-201ENSMUST00000023147 TwnkQ8CIW5 685 aa11.2□□□□□ -0.62
Ciita-201ENSMUST00000023147 Ago2Q8CJG0 860 aaKnown RBP11.2□□□□□ -0.62
Ciita-201ENSMUST00000023147 Chchd6Q91VN4 273 aa11.2□□□□□ -0.62
Ciita-201ENSMUST00000023147 Lrrc46Q9DAP0 323 aa11.2□□□□□ -0.62
Ciita-201ENSMUST00000023147 Actl7aQ9QY84 440 aa11.2□□□□□ -0.62
Ciita-201ENSMUST00000023147 Olfr726E9Q8X3 321 aa11.2□□□□□ -0.62
Ciita-201ENSMUST00000023147 Gm3424L7N298 263 aa11.2□□□□□ -0.62
Ciita-201ENSMUST00000023147 Gm8246M0QWX9 263 aa11.2□□□□□ -0.62
Ciita-201ENSMUST00000023147 Ets2P15037 468 aa11.2□□□□□ -0.62
Ciita-201ENSMUST00000023147 Snai1Q02085 264 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms