RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Serpina3fQ80X76 445 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Tbc1d10bQ8BHL3 798 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ccdc113Q8C5T8 377 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 CherpQ8CGZ0 936 aaKnown RBP12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Bag5Q8CI32 447 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 ThtpaQ8JZL3 224 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Bbs7Q8K2G4 715 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ces4aQ8R0W5 563 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Olfr617Q8VGA1 318 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Rsl24d1Q99L28 163 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Maf1Q9D0U6 258 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Mzb1Q9D8I1 188 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 KelQ9EQF2 713 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 PalmdQ9JHU2 551 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Habp4Q9JKS5 411 aaKnown RBP12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Racgap1Q9WVM1 628 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ccdc163A2AGD7 326 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Mageb2A2AHM0 380 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Grin3aA2AIR5 1135 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ptar1E9QAB6 424 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 PklrP53657 574 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Npr3P70180 536 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Polr1bP70700 1135 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Thrap3Q569Z6 951 aaKnown RBP12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Kpna1Q60960 538 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 RetsatQ64FW2 609 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ccdc154Q6RUT8 657 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Tmc7Q8C428 726 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Znf426Q8R1D1 550 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ttc4Q8R3H9 386 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Slc5a2Q923I7 670 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Actr3Q99JY9 418 aaKnown RBP12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Rnf135Q9CWS1 417 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Erp44Q9D1Q6 406 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Q9DAQ4 598 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Rtn3Q9ES97 964 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Vav3Q9R0C8 847 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 1700018F24RikB2RW27 314 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Vmn2r79E9Q067 851 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Exoc7O35250 697 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Rad51bO35719 350 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Mpp3O88910 568 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Wnt10bP48614 389 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Drd4P51436 387 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Sycp3P70281 254 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Lgr6Q3UVD5 967 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 BC051142Q3V0M8 400 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gas7Q60780 421 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ddx5Q61656 614 aaKnown RBP12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Mcf2lQ64096 1149 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Tmem132dQ76HP3 1097 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Arhgap25Q8BYW1 648 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ugt2b34Q8K154 532 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Haus3Q8QZX2 570 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Mrpl1Q99N96 336 aaKnown RBP12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Cpne8Q9DC53 577 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Rassf7Q9DD19 359 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 CtsjQ9R014 334 aa12□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Plxnb2B2RXS4 1842 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gm21149A0A0G2JFY7 255 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Apol10bG3X9K7 334 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Speer4eK7N6S8 255 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gm17019K7N6W5 255 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Pde4aO89084 844 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 ThraP63058 492 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Apba2P98084 750 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gxylt1Q3UHH8 404 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Pdap1Q3UHX2 181 aaKnown RBP11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Grik5Q61626 979 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gemin8Q8BHE1 238 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 GanQ8CA72 597 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Wdr45bQ9CR39 344 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Chordc1Q9D1P4 331 aaKnown RBP11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Cdc42ep4Q9JM96 349 aaKnown RBP11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Lcn6A2AJB9 181 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Bfsp1A2AMT1 669 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ankle1A8VU90 534 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Krt36B1AQ75 473 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gm3095E9Q058 166 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Cyth3O08967 399 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 ZfrO88532 1074 aaKnown RBP11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Slc2a7P0C6A1 513 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Col6a1Q04857 1025 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 SpoplQ2M2N2 392 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gprasp2Q8BUY8 826 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 SelenomQ8VHC3 145 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Havcr2Q8VIM0 281 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Tmem246Q91YV9 403 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Dqx1Q924H9 718 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Pacsin3Q99JB8 424 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Txndc12Q9CQU0 170 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 GrapQ9CX99 217 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Arhgef7Q9ES28 862 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Kcnq2Q9Z351 759 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Nrxn2E9Q7X7 1710 aa11.99□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gm5737A0A140LI11 423 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 4931406B18RikA2RSL7 367 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 FosP01101 380 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 KitP05532 979 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Serpinc1P32261 465 aa11.98□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms