RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Limd1Q9QXD8 668 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Rgs17Q9QZB0 210 aa17.16■□□□□ 0.34
Shh-201ENSMUST00000002708 Brca1P48754 1812 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Lrriq4A6H6A4 596 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Grik3B1AS29 919 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Mcpt4P21812 246 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Vps72Q62481 368 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Kif11Q6P9P6 1052 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Elac2Q80Y81 831 aaKnown RBP17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 IapP03975 557 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Ass1P16460 412 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Zfp42P22227 288 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Usp10P52479 792 aaKnown RBP17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Irf3P70671 419 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Mark3Q03141 753 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 DselQ0VBN2 1207 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Otud5Q3U2S4 566 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Lrch2Q3UMG5 773 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Gm8773Q3UQ24 132 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Tdrd5Q5VCS6 1040 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Lsm8Q6ZWM4 96 aaKnown RBP17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Ccnt2Q7TQK0 723 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Olfr1505Q7TQQ2 316 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 CyldQ80TQ2 952 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Ap3m2Q8R2R9 418 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Glis2Q8VDL9 521 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Nr1h3Q9Z0Y9 445 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Aldh18a1Q9Z110 795 aa17.15■□□□□ 0.34
Shh-201ENSMUST00000002708 Robo3Q9Z2I4 1366 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 1700064H15RikD3Z4D4 81 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Pcdh9F8VPK8 1237 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Cetn1P41209 172 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 ArsiQ32KI9 573 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Garnl3Q3V0G7 1038 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 LbpQ61805 481 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Q6GQV0 436 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Taf2Q8C176 1104 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Pcdha3Q91Y16 942 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Tomm20lQ9D4V6 152 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Slc12a4Q9JIS8 1085 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 PodxlQ9R0M4 503 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Gm12394A2AKP6 982 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Ccdc13D3YV10 709 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Tekt5G5E8A8 557 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Xbp1O35426 267 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Shoc2O88520 582 aaKnown RBP17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 CiitaP79621 1155 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 GnasQ6R0H7 1133 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 NostrinQ6WKZ7 506 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Sh3tc2Q80VA5 1289 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Nipal4Q8BZF2 406 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Plcb4Q91UZ1 1175 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Q9CPS8 106 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 4930519G04RikQ9CPT7 205 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Xpo7Q9EPK7 1087 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Sh2d3cQ9QZS8 854 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Plod1Q9R0E2 728 aa17.14■□□□□ 0.33
Shh-201ENSMUST00000002708 Fam171a2A2A699 822 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Gm16430A6X8J1 155 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Tnnc2P20801 160 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Gjb1P28230 283 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Elk3P41971 409 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Clcn3P51791 818 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Smad1P70340 465 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Gbp8Q2V6D6 525 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Smyd5Q3TYX3 416 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Itga1Q3V3R4 1179 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Rap1gap2Q5SVL6 712 aaKnown RBP17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Ripor1Q68FE6 1223 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 SrlQ7TQ48 910 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Olfr670Q7TRP3 312 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Zdhhc15Q8BGJ0 337 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Tmem132cQ8CEF9 1099 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 PygbQ8CI94 843 aaKnown RBP17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Map4k3Q99JP0 894 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Tas1r1Q99PG6 842 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Mageb3Q9D2H4 330 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Slxl1Q9D515 155 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Ssxb9A2BI93 185 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Galnt4O08832 578 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Sesn2P58043 480 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Slc24a2Q14BI1 711 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Nsun2Q1HFZ0 757 aaKnown RBP17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Gm10392Q3V3I3 114 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Hmgb4Q6P8W9 181 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Chn2Q80XD1 332 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Fbxo44Q8BK26 255 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Tubgcp5Q8BKN5 1024 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 CmasQ99KK2 432 aaKnown RBP17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Ttc33Q9D6K7 262 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Igdcc4Q9EQS9 1252 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Atp6v1c1Q9Z1G3 382 aa17.13■□□□□ 0.33
Shh-201ENSMUST00000002708 Siah3B2RWG3 268 aa17.12■□□□□ 0.33
Shh-201ENSMUST00000002708 Psmc1P62192 440 aa17.12■□□□□ 0.33
Shh-201ENSMUST00000002708 Grm1P97772 1199 aa17.12■□□□□ 0.33
Shh-201ENSMUST00000002708 Ampd1Q3V1D3 745 aa17.12■□□□□ 0.33
Shh-201ENSMUST00000002708 March4Q80TE3 409 aa17.12■□□□□ 0.33
Shh-201ENSMUST00000002708 Ttc39bQ8BYY4 617 aa17.12■□□□□ 0.33
Shh-201ENSMUST00000002708 Snx30Q8CE50 437 aa17.12■□□□□ 0.33
Shh-201ENSMUST00000002708 Arfip2Q8K221 341 aa17.12■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 57.1 ms