RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	CSM4	Q08955	156 aa		5.67	□□□□□ -1.5
TGA1	tA(UGC)A	SNU23	Q12368	194 aa	Predicted RBP	5.67	□□□□□ -1.5
TGA1	tA(UGC)A	RPL33A	P05744	107 aa	Known RBP	5.66	□□□□□ -1.5
TGA1	tA(UGC)A	ADH3	P07246	375 aa	Known RBP	5.66	□□□□□ -1.5
TGA1	tA(UGC)A	YGL010W	P25338	174 aa		5.66	□□□□□ -1.5
TGA1	tA(UGC)A	SDH8	P38345	138 aa		5.66	□□□□□ -1.5
TGA1	tA(UGC)A	PAU7	P39545	55 aa		5.66	□□□□□ -1.5
TGA1	tA(UGC)A	RPL33B	P41056	107 aa	Known RBP	5.66	□□□□□ -1.5
TGA1	tA(UGC)A	PAU5	P43575	122 aa		5.66	□□□□□ -1.5
TGA1	tA(UGC)A	THG1	P53215	237 aa	Known RBP	5.66	□□□□□ -1.5
TGA1	tA(UGC)A	CNB1	P25296	175 aa		5.65	□□□□□ -1.5
TGA1	tA(UGC)A	YKR032W	P36127	104 aa		5.65	□□□□□ -1.5
TGA1	tA(UGC)A	APS2	Q00381	147 aa		5.65	□□□□□ -1.5
TGA1	tA(UGC)A	GTO3	Q04806	366 aa		5.65	□□□□□ -1.5
TGA1	tA(UGC)A	YMR122W-A	Q3E842	84 aa		5.65	□□□□□ -1.5
TGA1	tA(UGC)A	PAU15	P40585	124 aa		5.64	□□□□□ -1.51
TGA1	tA(UGC)A	YJL028W	P47062	111 aa		5.64	□□□□□ -1.51
TGA1	tA(UGC)A	ERI1	P62651	68 aa	Known RBP	5.64	□□□□□ -1.51
TGA1	tA(UGC)A	YDR115W	Q04598	105 aa		5.64	□□□□□ -1.51
TGA1	tA(UGC)A	YNR034W-A	Q3E841	98 aa		5.64	□□□□□ -1.51
TGA1	tA(UGC)A	RTC6	O14464	93 aa		5.63	□□□□□ -1.51
TGA1	tA(UGC)A	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.63	□□□□□ -1.51
TGA1	tA(UGC)A	TY1A-DR6	P0CX70	440 aa		5.63	□□□□□ -1.51
TGA1	tA(UGC)A	TY1A-ER1	P0CX71	440 aa		5.63	□□□□□ -1.51
TGA1	tA(UGC)A	TY1A-LR2	P0CX72	440 aa		5.63	□□□□□ -1.51
TGA1	tA(UGC)A	TY1A-PL	P0CX73	440 aa		5.63	□□□□□ -1.51
TGA1	tA(UGC)A	TY1A-JR1	P0CX74	440 aa		5.63	□□□□□ -1.51
TGA1	tA(UGC)A	TY1A-LR3	P0CX75	440 aa		5.63	□□□□□ -1.51
TGA1	tA(UGC)A	TY1A-ML2	P0CX76	440 aa		5.63	□□□□□ -1.51
TGA1	tA(UGC)A	MRP49	P32388	137 aa		5.63	□□□□□ -1.51
TGA1	tA(UGC)A	ATG8	P38182	117 aa	RIP-Chip data	5.63	□□□□□ -1.51	not detected
TGA1	tA(UGC)A	TEM1	P38987	245 aa		5.63	□□□□□ -1.51
TGA1	tA(UGC)A	VMA21	P41806	77 aa		5.63	□□□□□ -1.51
TGA1	tA(UGC)A	YGR149W	P48236	432 aa		5.63	□□□□□ -1.51
TGA1	tA(UGC)A	TY1A-GR1	Q12085	440 aa		5.63	□□□□□ -1.51
TGA1	tA(UGC)A	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.63	□□□□□ -1.51
TGA1	tA(UGC)A	TY1A-OL	Q92392	440 aa	Known RBP	5.63	□□□□□ -1.51
TGA1	tA(UGC)A	YPL229W	Q99395	206 aa		5.63	□□□□□ -1.51
TGA1	tA(UGC)A	RPL42A	P0CX27	106 aa	Known RBP	5.62	□□□□□ -1.51
TGA1	tA(UGC)A	RPL42B	P0CX28	106 aa	Known RBP	5.62	□□□□□ -1.51
TGA1	tA(UGC)A	DAN1	P47178	298 aa		5.62	□□□□□ -1.51
TGA1	tA(UGC)A	TVP18	Q04767	167 aa		5.62	□□□□□ -1.51
TGA1	tA(UGC)A	PET8	P38921	284 aa		5.61	□□□□□ -1.51
TGA1	tA(UGC)A	PMP3	P87284	55 aa		5.61	□□□□□ -1.51
TGA1	tA(UGC)A	SDS23	P53172	527 aa		5.6	□□□□□ -1.51
TGA1	tA(UGC)A	RPL23A	P0CX41	137 aa	Known RBP	5.59	□□□□□ -1.51
TGA1	tA(UGC)A	RPL23B	P0CX42	137 aa	Known RBP	5.59	□□□□□ -1.51
TGA1	tA(UGC)A	ANB1	P19211	157 aa		5.59	□□□□□ -1.51
TGA1	tA(UGC)A	ARC15	P40518	154 aa	RIP-Chip data	5.59	□□□□□ -1.51	not detected
TGA1	tA(UGC)A	DCV1	P43595	202 aa		5.59	□□□□□ -1.51
TGA1	tA(UGC)A	LCL2	Q08045	131 aa		5.59	□□□□□ -1.51
TGA1	tA(UGC)A	DIF1	O13577	133 aa		5.58	□□□□□ -1.52
TGA1	tA(UGC)A	RPL11A	P0C0W9	174 aa	Known RBP	5.58	□□□□□ -1.52
TGA1	tA(UGC)A	DAD2	P36162	133 aa		5.58	□□□□□ -1.52
TGA1	tA(UGC)A	SAP30	P38429	201 aa		5.58	□□□□□ -1.52
TGA1	tA(UGC)A	FSF1	Q12029	327 aa	Known RBP	5.58	□□□□□ -1.52
TGA1	tA(UGC)A	POM33	Q12164	279 aa		5.58	□□□□□ -1.52
TGA1	tA(UGC)A	RPL11B	Q3E757	174 aa	Predicted RBP	5.58	□□□□□ -1.52
TGA1	tA(UGC)A	YCR024C-B	Q3E7Z8	88 aa		5.58	□□□□□ -1.52
TGA1	tA(UGC)A	YPR010C-A	A5Z2X5	72 aa		5.57	□□□□□ -1.52
TGA1	tA(UGC)A	HHO1	P53551	258 aa		5.57	□□□□□ -1.52
TGA1	tA(UGC)A	MGR2	Q02889	113 aa		5.57	□□□□□ -1.52
TGA1	tA(UGC)A	RRT15	Q3E811	62 aa		5.57	□□□□□ -1.52
TGA1	tA(UGC)A	SAL1	D6W196	494 aa		5.56	□□□□□ -1.52
TGA1	tA(UGC)A	NUP42	P49686	430 aa	Known RBP	5.56	□□□□□ -1.52
TGA1	tA(UGC)A	YMR320W	Q04897	101 aa		5.56	□□□□□ -1.52
TGA1	tA(UGC)A	RPL16A	P26784	199 aa	Known RBP	5.55	□□□□□ -1.52
TGA1	tA(UGC)A	YBR013C	P38215	129 aa		5.55	□□□□□ -1.52
TGA1	tA(UGC)A	SEC4	P07560	215 aa	Known RBP	5.54	□□□□□ -1.52
TGA1	tA(UGC)A	PAU19	P0CE85	124 aa		5.54	□□□□□ -1.52
TGA1	tA(UGC)A	PAU21	P0CE86	164 aa		5.54	□□□□□ -1.52
TGA1	tA(UGC)A	PAU22	P0CE87	164 aa		5.54	□□□□□ -1.52
TGA1	tA(UGC)A	PAU3	P25610	124 aa		5.54	□□□□□ -1.52
TGA1	tA(UGC)A	YJR146W	P47174	117 aa		5.54	□□□□□ -1.52
TGA1	tA(UGC)A	RPS22B	Q3E7Y3	130 aa	Known RBP	5.54	□□□□□ -1.52
TGA1	tA(UGC)A	POR1	P04840	283 aa	Known RBP	5.53	□□□□□ -1.52
TGA1	tA(UGC)A	PFY1	P07274	126 aa		5.53	□□□□□ -1.52
TGA1	tA(UGC)A	YKR070W	P36151	352 aa	Known RBP	5.53	□□□□□ -1.52
TGA1	tA(UGC)A	ERG28	P40030	148 aa		5.53	□□□□□ -1.52
TGA1	tA(UGC)A	YER076C	P40049	302 aa		5.53	□□□□□ -1.52
TGA1	tA(UGC)A	SVP26	P38869	228 aa		5.52	□□□□□ -1.53
TGA1	tA(UGC)A	BET5	Q03630	159 aa		5.52	□□□□□ -1.53
TGA1	tA(UGC)A	FCF1	Q05498	189 aa	Predicted RBP	5.52	□□□□□ -1.53
TGA1	tA(UGC)A	AQY1	P0CD91	305 aa		5.51	□□□□□ -1.53
TGA1	tA(UGC)A	YIL059C	P40520	121 aa		5.51	□□□□□ -1.53
TGA1	tA(UGC)A	GLO1	P50107	326 aa		5.51	□□□□□ -1.53
TGA1	tA(UGC)A	YIL014C-A	Q02598	104 aa		5.51	□□□□□ -1.53
TGA1	tA(UGC)A	TOS6	P48560	102 aa		5.5	□□□□□ -1.53
TGA1	tA(UGC)A	ERG27	Q12452	347 aa	Known RBP	5.5	□□□□□ -1.53
TGA1	tA(UGC)A	MRP10	O75012	95 aa		5.49	□□□□□ -1.53
TGA1	tA(UGC)A	TRP1	P00912	224 aa		5.49	□□□□□ -1.53
TGA1	tA(UGC)A	PRE1	P22141	198 aa	Known RBP	5.49	□□□□□ -1.53
TGA1	tA(UGC)A	YBL081W	P38180	368 aa	Known RBP	5.49	□□□□□ -1.53
TGA1	tA(UGC)A	YBR219C	P38317	127 aa		5.49	□□□□□ -1.53
TGA1	tA(UGC)A	NSE4	P43124	402 aa		5.49	□□□□□ -1.53
TGA1	tA(UGC)A	YGL088W	P53151	121 aa		5.49	□□□□□ -1.53
TGA1	tA(UGC)A	YLR194C	Q05777	254 aa		5.49	□□□□□ -1.53
TGA1	tA(UGC)A	YDR034C-A	P0C289	58 aa		5.47	□□□□□ -1.53
TGA1	tA(UGC)A	YBR209W	P38311	105 aa		5.47	□□□□□ -1.53
TGA1	tA(UGC)A	YEL008W	P40001	126 aa		5.47	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms