RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 YCL001W-BQ96VH2 84 aa2.26□□□□□ -2.05
snR42snR42 FMP49A0A023PZB3 126 aa2.25□□□□□ -2.05
snR42snR42 SRB6P32570 121 aa2.25□□□□□ -2.05
snR42snR42 KTI12P34253 313 aaKnown RBP2.25□□□□□ -2.05
snR42snR42 MIX23P38162 196 aa2.25□□□□□ -2.05
snR42snR42 YHR140WP38842 239 aa2.25□□□□□ -2.05
snR42snR42 RPB11P38902 120 aa2.25□□□□□ -2.05
snR42snR42 TEM1P38987 245 aa2.25□□□□□ -2.05
snR42snR42 KRE9P39005 276 aa2.25□□□□□ -2.05
snR42snR42 YNL200CP40165 246 aaKnown RBP2.25□□□□□ -2.05
snR42snR42 PGD1P40356 397 aa2.25□□□□□ -2.05
snR42snR42 THG1P53215 237 aaKnown RBP2.25□□□□□ -2.05
snR42snR42 YGR026WP53217 278 aa2.25□□□□□ -2.05
snR42snR42 PMP3P87284 55 aa2.25□□□□□ -2.05
snR42snR42 PBA1Q05778 276 aa2.25□□□□□ -2.05
snR42snR42 DGA1Q08650 418 aa2.25□□□□□ -2.05
snR42snR42 RTC6O14464 93 aa2.24□□□□□ -2.05
snR42snR42 RPL27AP0C2H6 136 aaKnown RBP2.24□□□□□ -2.05
snR42snR42 YGL010WP25338 174 aa2.24□□□□□ -2.05
snR42snR42 YIL024CP40543 189 aa2.24□□□□□ -2.05
snR42snR42 MOG1P47123 218 aa2.24□□□□□ -2.05
snR42snR42 UBC12P52491 188 aa2.24□□□□□ -2.05
snR42snR42 GIM5Q04493 163 aa2.24□□□□□ -2.05
snR42snR42 TVP18Q04767 167 aa2.24□□□□□ -2.05
snR42snR42 VMA9Q3E7B6 73 aa2.24□□□□□ -2.05
snR42snR42 TIR1P10863 254 aa2.23□□□□□ -2.05
snR42snR42 MRPL31P14063 131 aaPredicted RBP2.23□□□□□ -2.05
snR42snR42 CUP2P15315 225 aa2.23□□□□□ -2.05
snR42snR42 YCR023CP25351 611 aa2.23□□□□□ -2.05
snR42snR42 LDS1P31379 325 aa2.23□□□□□ -2.05
snR42snR42 QRI5P32344 111 aa2.23□□□□□ -2.05
snR42snR42 ZRT1P32804 376 aa2.23□□□□□ -2.05
snR42snR42 DAD2P36162 133 aa2.23□□□□□ -2.05
snR42snR42 PAU7P39545 55 aa2.23□□□□□ -2.05
snR42snR42 PHS1P40857 217 aa2.23□□□□□ -2.05
snR42snR42 PAU5P43575 122 aa2.23□□□□□ -2.05
snR42snR42 ERI1P62651 68 aaKnown RBP2.23□□□□□ -2.05
snR42snR42 GPI19Q04082 140 aa2.23□□□□□ -2.05
snR42snR42 GTO3Q04806 366 aa2.23□□□□□ -2.05
snR42snR42 DPP1Q05521 289 aa2.23□□□□□ -2.05
snR42snR42 LCL2Q08045 131 aa2.23□□□□□ -2.05
snR42snR42 POM33Q12164 279 aa2.23□□□□□ -2.05
snR42snR42 RRT15Q3E811 62 aa2.23□□□□□ -2.05
snR42snR42 YAR023CD6VPM8 179 aa2.22□□□□□ -2.05
snR42snR42 SRP21P32342 167 aa2.22□□□□□ -2.05
snR42snR42 YBR209WP38311 105 aa2.22□□□□□ -2.05
snR42snR42 HSP10P38910 106 aa2.22□□□□□ -2.05
snR42snR42 SRP14P38985 146 aa2.22□□□□□ -2.05
snR42snR42 YIL059CP40520 121 aa2.22□□□□□ -2.05
snR42snR42 APS2Q00381 147 aa2.22□□□□□ -2.05
snR42snR42 FCF1Q05498 189 aaPredicted RBP2.22□□□□□ -2.05
snR42snR42 ATP14Q12349 124 aa2.22□□□□□ -2.05
snR42snR42 WIP1Q2V2P8 89 aa2.22□□□□□ -2.05
snR42snR42 YNR034W-AQ3E841 98 aa2.22□□□□□ -2.05
snR42snR42 YPR010C-AA5Z2X5 72 aa2.21□□□□□ -2.06
snR42snR42 SAL1D6W196 494 aa2.21□□□□□ -2.06
snR42snR42 RPL33AP05744 107 aaKnown RBP2.21□□□□□ -2.06
snR42snR42 ADH3P07246 375 aaKnown RBP2.21□□□□□ -2.06
snR42snR42 YDR034C-AP0C289 58 aa2.21□□□□□ -2.06
snR42snR42 RPL42AP0CX27 106 aaKnown RBP2.21□□□□□ -2.06
snR42snR42 RPL42BP0CX28 106 aaKnown RBP2.21□□□□□ -2.06
snR42snR42 HMRA1P0CY11 126 aa2.21□□□□□ -2.06
snR42snR42 NTF2P33331 125 aaKnown RBP2.21□□□□□ -2.06
snR42snR42 PAM17P36147 197 aa2.21□□□□□ -2.06
snR42snR42 MRPS9P38120 278 aa2.21□□□□□ -2.06
snR42snR42 ARC15P40518 154 aaRIP-Chip data2.21□□□□□ -2.06not detected
snR42snR42 RPL33BP41056 107 aaKnown RBP2.21□□□□□ -2.06
snR42snR42 DCV1P43595 202 aa2.21□□□□□ -2.06
snR42snR42 BNS1P50084 137 aa2.21□□□□□ -2.06
snR42snR42 SDS23P53172 527 aa2.21□□□□□ -2.06
snR42snR42 SNU23Q12368 194 aaPredicted RBP2.21□□□□□ -2.06
snR42snR42 YLL066W-BQ8TGJ7 56 aa2.21□□□□□ -2.06
snR42snR42 RPL32P38061 130 aaKnown RBP2.2□□□□□ -2.06
snR42snR42 YBR013CP38215 129 aa2.2□□□□□ -2.06
snR42snR42 YGL088WP53151 121 aa2.2□□□□□ -2.06
snR42snR42 YMR320WQ04897 101 aa2.2□□□□□ -2.06
snR42snR42 YMR122W-AQ3E842 84 aa2.2□□□□□ -2.06
snR42snR42 RPL23AP0CX41 137 aaKnown RBP2.19□□□□□ -2.06
snR42snR42 RPL23BP0CX42 137 aaKnown RBP2.19□□□□□ -2.06
snR42snR42 NHP6AP11632 93 aaKnown RBP2.19□□□□□ -2.06
snR42snR42 UBC5P15732 148 aa2.19□□□□□ -2.06
snR42snR42 AIM29P36154 155 aa2.19□□□□□ -2.06
snR42snR42 VMA21P41806 77 aa2.19□□□□□ -2.06
snR42snR42 YGR149WP48236 432 aa2.19□□□□□ -2.06
snR42snR42 ARC18Q05933 178 aaKnown RBP2.19□□□□□ -2.06
snR42snR42 ADH2P00331 348 aaKnown RBP2.18□□□□□ -2.06
snR42snR42 YKR070WP36151 352 aaKnown RBP2.18□□□□□ -2.06
snR42snR42 SEC72P39742 193 aaKnown RBP2.18□□□□□ -2.06
snR42snR42 ERG28P40030 148 aa2.18□□□□□ -2.06
snR42snR42 YER085CP40058 173 aa2.18□□□□□ -2.06
snR42snR42 OST3P48439 350 aa2.18□□□□□ -2.06
snR42snR42 SNA2P56508 79 aa2.18□□□□□ -2.06
snR42snR42 BET5Q03630 159 aa2.18□□□□□ -2.06
snR42snR42 FSF1Q12029 327 aaKnown RBP2.18□□□□□ -2.06
snR42snR42 YOP1Q12402 180 aa2.18□□□□□ -2.06
snR42snR42 YPR014CQ6B0W2 109 aa2.18□□□□□ -2.06
snR42snR42 YCL021W-AQ96VH3 125 aa2.18□□□□□ -2.06
snR42snR42 RPL16AP26784 199 aaKnown RBP2.17□□□□□ -2.06
snR42snR42 MRP49P32388 137 aa2.17□□□□□ -2.06
snR42snR42 YKR032WP36127 104 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 79.3 ms