RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W POP3P53833 195 aaPredicted RBP1.87□□□□□ -2.11
UBP15YMR304W TIM18Q08749 192 aa1.87□□□□□ -2.11
UBP15YMR304W PCL1P24867 279 aa1.87□□□□□ -2.11
UBP15YMR304W ANS1P38832 159 aa1.87□□□□□ -2.11
UBP15YMR304W CTR2P38865 189 aa1.87□□□□□ -2.11
UBP15YMR304W URM1P40554 99 aaPredicted RBP1.87□□□□□ -2.11
UBP15YMR304W CAB4P53332 305 aa1.87□□□□□ -2.11
UBP15YMR304W PET191Q02772 108 aa1.87□□□□□ -2.11
UBP15YMR304W COF1Q03048 143 aaKnown RBP1.87□□□□□ -2.11
UBP15YMR304W YLR050CQ12155 161 aaKnown RBP1.87□□□□□ -2.11
UBP15YMR304W YDL022C-AP0C5L6 82 aa1.87□□□□□ -2.11
UBP15YMR304W RPL30P14120 105 aaKnown RBP1.87□□□□□ -2.11
UBP15YMR304W YCR050CP25630 102 aa1.87□□□□□ -2.11
UBP15YMR304W CYB5P40312 120 aa1.87□□□□□ -2.11
UBP15YMR304W YGR269WP40326 108 aa1.87□□□□□ -2.11
UBP15YMR304W MTR3P48240 250 aaPredicted RBP1.87□□□□□ -2.11
UBP15YMR304W RPC11Q04307 110 aaPredicted RBP1.87□□□□□ -2.11
UBP15YMR304W LIP2Q06005 328 aa1.87□□□□□ -2.11
UBP15YMR304W RLM1Q12224 676 aa1.87□□□□□ -2.11
UBP15YMR304W TOM1Q03280 3268 aa1.86□□□□□ -2.11
UBP15YMR304W RPS22AP0C0W1 130 aaKnown RBP1.86□□□□□ -2.11
UBP15YMR304W ROX3P25046 220 aa1.86□□□□□ -2.11
UBP15YMR304W ERG4P25340 473 aa1.86□□□□□ -2.11
UBP15YMR304W AUR1P36107 401 aaPredicted RBP1.86□□□□□ -2.11
UBP15YMR304W SWD3P38123 315 aa1.86□□□□□ -2.11
UBP15YMR304W MBB1P39534 108 aa1.86□□□□□ -2.11
UBP15YMR304W HRT1Q08273 121 aa1.86□□□□□ -2.11
UBP15YMR304W YCR090CP25654 182 aaKnown RBP1.86□□□□□ -2.11
UBP15YMR304W YNR064CP53750 290 aa1.86□□□□□ -2.11
UBP15YMR304W MDN1Q12019 4910 aaKnown RBP1.86□□□□□ -2.11
UBP15YMR304W PDR17P53844 350 aa1.86□□□□□ -2.11
UBP15YMR304W YJL197C-AP0C5P0 93 aa1.85□□□□□ -2.11
UBP15YMR304W RPL16AP26784 199 aaKnown RBP1.85□□□□□ -2.11
UBP15YMR304W AGA1P32323 725 aa1.85□□□□□ -2.11
UBP15YMR304W MSA2P36157 363 aa1.85□□□□□ -2.11
UBP15YMR304W YBR063CP38083 404 aa1.85□□□□□ -2.11
UBP15YMR304W YEL073CP39974 107 aa1.85□□□□□ -2.11
UBP15YMR304W DCV1P43595 202 aa1.85□□□□□ -2.11
UBP15YMR304W RRT5P43607 289 aa1.85□□□□□ -2.11
UBP15YMR304W PCL2P25693 308 aa1.85□□□□□ -2.11
UBP15YMR304W YHL042WP38729 150 aa1.85□□□□□ -2.11
UBP15YMR304W CRH1P53301 507 aa1.85□□□□□ -2.11
UBP15YMR304W MGR2Q02889 113 aa1.85□□□□□ -2.11
UBP15YMR304W YHP1Q04116 353 aa1.85□□□□□ -2.11
UBP15YMR304W YMR320WQ04897 101 aa1.85□□□□□ -2.11
UBP15YMR304W YOL014WQ08110 124 aa1.85□□□□□ -2.11
UBP15YMR304W YOL166W-AQ8TGJ1 51 aa1.85□□□□□ -2.11
UBP15YMR304W IMP1P28627 190 aa1.85□□□□□ -2.11
UBP15YMR304W ECM15P35195 104 aa1.85□□□□□ -2.11
UBP15YMR304W MRPL11P36521 249 aaPredicted RBP1.85□□□□□ -2.11
UBP15YMR304W MIC26P50087 233 aa1.85□□□□□ -2.11
UBP15YMR304W YML122CQ03207 126 aa1.85□□□□□ -2.11
UBP15YMR304W YMR252CQ04814 134 aa1.85□□□□□ -2.11
UBP15YMR304W YLR281CQ05863 155 aa1.85□□□□□ -2.11
UBP15YMR304W PHO85P17157 305 aa1.84□□□□□ -2.11
UBP15YMR304W YBL059WP34224 193 aa1.84□□□□□ -2.11
UBP15YMR304W PAU24P38155 120 aa1.84□□□□□ -2.11
UBP15YMR304W MRP21P38175 177 aa1.84□□□□□ -2.11
UBP15YMR304W YBR292CP38357 123 aa1.84□□□□□ -2.11
UBP15YMR304W DAD3P69850 94 aa1.84□□□□□ -2.11
UBP15YMR304W RPL21AQ02753 160 aaKnown RBP1.84□□□□□ -2.11
UBP15YMR304W YMR181CQ03231 154 aa1.84□□□□□ -2.11
UBP15YMR304W RPL21BQ12672 160 aaKnown RBP1.84□□□□□ -2.11
UBP15YMR304W YBL112CQ3E7Y4 105 aa1.84□□□□□ -2.11
UBP15YMR304W RIM9Q04734 239 aa1.84□□□□□ -2.12
UBP15YMR304W FUN19P28003 413 aaPredicted RBP1.84□□□□□ -2.12
UBP15YMR304W MRPS12P53732 153 aa1.84□□□□□ -2.12
UBP15YMR304W YJR112W-AQ3E743 109 aa1.84□□□□□ -2.12
UBP15YMR304W MST28P39552 234 aa1.83□□□□□ -2.12
UBP15YMR304W VHS2P40463 436 aa1.83□□□□□ -2.12
UBP15YMR304W SPG3Q04398 127 aaPredicted RBP1.83□□□□□ -2.12
UBP15YMR304W YHR214C-DP0CX93 97 aa1.83□□□□□ -2.12
UBP15YMR304W YIL029CP40538 142 aa1.83□□□□□ -2.12
UBP15YMR304W TES1P41903 349 aaKnown RBP1.83□□□□□ -2.12
UBP15YMR304W LSM3P57743 89 aaKnown RBP1.83□□□□□ -2.12
UBP15YMR304W HSK3P69852 69 aa1.83□□□□□ -2.12
UBP15YMR304W VPS55P47111 140 aa1.82□□□□□ -2.12
UBP15YMR304W LSM6Q06406 86 aaKnown RBP1.82□□□□□ -2.12
UBP15YMR304W YDL242WQ07746 117 aa1.82□□□□□ -2.12
UBP15YMR304W MCH4Q08268 501 aa1.82□□□□□ -2.12
UBP15YMR304W MPD1Q12404 318 aaKnown RBP1.82□□□□□ -2.12
UBP15YMR304W BXI1P48558 297 aa1.82□□□□□ -2.12
UBP15YMR304W KNH1P50112 268 aa1.82□□□□□ -2.12
UBP15YMR304W ADD37Q03233 198 aa1.82□□□□□ -2.12
UBP15YMR304W RAF1Q06891 181 aa1.82□□□□□ -2.12
UBP15YMR304W YAR066WP0CX18 203 aa1.82□□□□□ -2.12
UBP15YMR304W YHR214WP0CX19 203 aa1.82□□□□□ -2.12
UBP15YMR304W FZF1P32805 299 aa1.82□□□□□ -2.12
UBP15YMR304W YIL059CP40520 121 aa1.82□□□□□ -2.12
UBP15YMR304W YGL034CP53186 121 aa1.82□□□□□ -2.12
UBP15YMR304W GAT3Q07928 141 aa1.82□□□□□ -2.12
UBP15YMR304W YML100W-AQ8TGT0 57 aa1.82□□□□□ -2.12
UBP15YMR304W PAU1P0CE88 120 aa1.81□□□□□ -2.12
UBP15YMR304W PAU14P0CE89 120 aa1.81□□□□□ -2.12
UBP15YMR304W PAU6P0CE90 120 aa1.81□□□□□ -2.12
UBP15YMR304W PAU18P0CE91 120 aa1.81□□□□□ -2.12
UBP15YMR304W PAU8P0CE92 120 aa1.81□□□□□ -2.12
UBP15YMR304W PAU11P0CE93 120 aa1.81□□□□□ -2.12
UBP15YMR304W PAU13P38725 120 aa1.81□□□□□ -2.12
UBP15YMR304W YIR020CP40575 100 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 60.8 ms