RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C ZEO1Q08245 113 aa2.24□□□□□ -2.05
PEX12YMR026C OST5Q92316 86 aa2.24□□□□□ -2.05
PEX12YMR026C LYS2P07702 1392 aa2.23□□□□□ -2.05
PEX12YMR026C CDC39P25655 2108 aaKnown RBP2.23□□□□□ -2.05
PEX12YMR026C YFL065CP43539 102 aa2.23□□□□□ -2.05
PEX12YMR026C RPL36BO14455 100 aaKnown RBP2.22□□□□□ -2.05
PEX12YMR026C RPL36AP05745 100 aaPredicted RBP2.22□□□□□ -2.05
PEX12YMR026C PAU12P53343 120 aa2.22□□□□□ -2.05
PEX12YMR026C PFY1P07274 126 aa2.21□□□□□ -2.06
PEX12YMR026C YHR212W-AP0CX91 67 aa2.21□□□□□ -2.06
PEX12YMR026C MRPL15P36523 253 aa2.21□□□□□ -2.06
PEX12YMR026C ATG8P38182 117 aaRIP-Chip data2.21□□□□□ -2.06not detected
PEX12YMR026C HUR1P45820 110 aa2.21□□□□□ -2.06
PEX12YMR026C YMR122CQ03879 124 aa2.21□□□□□ -2.06
PEX12YMR026C REV3P14284 1504 aa2.21□□□□□ -2.06
PEX12YMR026C GEA2P39993 1459 aaKnown RBP2.2□□□□□ -2.06
PEX12YMR026C UBC4P15731 148 aa2.2□□□□□ -2.06
PEX12YMR026C YIR020CP40575 100 aa2.2□□□□□ -2.06
PEX12YMR026C GTT1P40582 234 aa2.2□□□□□ -2.06
PEX12YMR026C YMR090WQ04304 227 aaKnown RBP2.2□□□□□ -2.06
PEX12YMR026C YLR194CQ05777 254 aa2.2□□□□□ -2.06
PEX12YMR026C SWC7Q06707 132 aa2.2□□□□□ -2.06
PEX12YMR026C GSC2P40989 1895 aa2.2□□□□□ -2.06
PEX12YMR026C YIL014C-AQ02598 104 aa2.19□□□□□ -2.06
PEX12YMR026C PRM3Q08931 133 aa2.19□□□□□ -2.06
PEX12YMR026C DAD1Q12248 94 aa2.19□□□□□ -2.06
PEX12YMR026C YOS1Q3E834 85 aa2.19□□□□□ -2.06
PEX12YMR026C UBR2Q07963 1872 aa2.19□□□□□ -2.06
PEX12YMR026C SEN15Q04675 128 aa2.18□□□□□ -2.06
PEX12YMR026C RPL22BP56628 122 aaKnown RBP2.17□□□□□ -2.06
PEX12YMR026C PCC1Q3E833 88 aa2.17□□□□□ -2.06
PEX12YMR026C MIC10Q96VH5 97 aa2.17□□□□□ -2.06
PEX12YMR026C CAT8P39113 1433 aa2.17□□□□□ -2.06
PEX12YMR026C PAU2P32612 120 aa2.16□□□□□ -2.06
PEX12YMR026C AIM4P38305 123 aaPredicted RBP2.16□□□□□ -2.06
PEX12YMR026C YHL037CP38733 133 aa2.16□□□□□ -2.06
PEX12YMR026C VMA21P41806 77 aa2.16□□□□□ -2.06
PEX12YMR026C COA4Q05809 96 aa2.16□□□□□ -2.06
PEX12YMR026C HPA2Q06592 156 aa2.16□□□□□ -2.06
PEX12YMR026C YPR203WQ08994 102 aa2.16□□□□□ -2.06
PEX12YMR026C AQY2P0CD90 149 aa2.15□□□□□ -2.07
PEX12YMR026C SRX1P36077 127 aa2.15□□□□□ -2.07
PEX12YMR026C PAU24P38155 120 aa2.15□□□□□ -2.07
PEX12YMR026C POR2P40478 281 aa2.15□□□□□ -2.07
PEX12YMR026C SNN1P48232 102 aa2.15□□□□□ -2.07
PEX12YMR026C YCL001W-BQ96VH2 84 aa2.15□□□□□ -2.07
PEX12YMR026C YRF1-3P0CX14 1859 aa2.14□□□□□ -2.07
PEX12YMR026C YRF1-7P0CX15 1859 aa2.14□□□□□ -2.07
PEX12YMR026C YRF1-6P53819 1859 aa2.14□□□□□ -2.07
PEX12YMR026C COX23P38824 151 aa2.14□□□□□ -2.07
PEX12YMR026C MIX14Q04341 121 aa2.14□□□□□ -2.07
PEX12YMR026C KSH1Q8TGJ3 72 aa2.14□□□□□ -2.07
PEX12YMR026C YLR419WQ06698 1435 aaKnown RBP2.14□□□□□ -2.07
PEX12YMR026C SSN2P38931 1420 aa2.12□□□□□ -2.07
PEX12YMR026C YNL122CP53921 115 aaPredicted RBP2.12□□□□□ -2.07
PEX12YMR026C IRC21Q04772 201 aa2.12□□□□□ -2.07
PEX12YMR026C DNA2P38859 1522 aa2.12□□□□□ -2.07
PEX12YMR026C BPT1P14772 1559 aa2.11□□□□□ -2.07
PEX12YMR026C PDR10P51533 1564 aa2.11□□□□□ -2.07
PEX12YMR026C YSF3P0C074 85 aaPredicted RBP2.11□□□□□ -2.07
PEX12YMR026C PAU19P0CE85 124 aa2.11□□□□□ -2.07
PEX12YMR026C PAU3P25610 124 aa2.11□□□□□ -2.07
PEX12YMR026C YAR064WP39563 99 aa2.1□□□□□ -2.07
PEX12YMR026C YIL163CP40448 117 aa2.1□□□□□ -2.07
PEX12YMR026C YJL009WP47078 108 aa2.1□□□□□ -2.07
PEX12YMR026C COA6Q3E846 104 aa2.1□□□□□ -2.07
PEX12YMR026C YPK9Q12697 1472 aa2.08□□□□□ -2.08
PEX12YMR026C RPL22AP05749 121 aaKnown RBP2.08□□□□□ -2.08
PEX12YMR026C YCR075W-AQ3E830 75 aa2.07□□□□□ -2.08
PEX12YMR026C PAU16P35994 123 aa2.06□□□□□ -2.08
PEX12YMR026C PAU15P40585 124 aa2.06□□□□□ -2.08
PEX12YMR026C YLR363W-AQ3E747 85 aa2.06□□□□□ -2.08
PEX12YMR026C BNI1P41832 1953 aa2.06□□□□□ -2.08
PEX12YMR026C RPA190P10964 1664 aaKnown RBP2.06□□□□□ -2.08
PEX12YMR026C ICS3P47034 131 aa2.05□□□□□ -2.08
PEX12YMR026C YMR321CQ04898 105 aa2.05□□□□□ -2.08
PEX12YMR026C FIT3Q08907 204 aa2.05□□□□□ -2.08
PEX12YMR026C YLR285C-AQ3E771 56 aa2.05□□□□□ -2.08
PEX12YMR026C CYB5P40312 120 aa2.04□□□□□ -2.08
PEX12YMR026C TY4B-JP47024 1803 aa2.04□□□□□ -2.08
PEX12YMR026C CCW12Q12127 133 aa2.04□□□□□ -2.08
PEX12YMR026C YCL048W-AQ2V2Q2 79 aa2.04□□□□□ -2.08
PEX12YMR026C RSF2P46974 1380 aa2.03□□□□□ -2.08
PEX12YMR026C ROM2P51862 1356 aaKnown RBP2.03□□□□□ -2.08
PEX12YMR026C HMRA2P0CY13 119 aa2.03□□□□□ -2.08
PEX12YMR026C YCR001WP25347 104 aa2.03□□□□□ -2.08
PEX12YMR026C YHR138CP38841 114 aaPredicted RBP2.03□□□□□ -2.08
PEX12YMR026C RSM19P53733 91 aaPredicted RBP2.03□□□□□ -2.08
PEX12YMR026C YOR072WQ08486 104 aa2.03□□□□□ -2.08
PEX12YMR026C ESC1Q03661 1658 aaKnown RBP2.02□□□□□ -2.09
PEX12YMR026C YOL013W-AP0C272 63 aaPredicted RBP2.02□□□□□ -2.09
PEX12YMR026C YBR013CP38215 129 aa2.02□□□□□ -2.09
PEX12YMR026C YHL005CP38752 130 aa2.01□□□□□ -2.09
PEX12YMR026C VPS55P47111 140 aa2.01□□□□□ -2.09
PEX12YMR026C MIC27P50945 234 aa2.01□□□□□ -2.09
PEX12YMR026C MGR2Q02889 113 aa2.01□□□□□ -2.09
PEX12YMR026C YGL041C-BQ3E750 60 aa2.01□□□□□ -2.09
PEX12YMR026C YGR240C-AQ3E786 66 aa2.01□□□□□ -2.09
PEX12YMR026C YIL102CP40488 101 aa2□□□□□ -2.09
PEX12YMR026C EMC5P40540 141 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms