RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C TY1A-PLP0CX73 440 aa8.33□□□□□ -1.08
YKR040CYKR040C TY1A-JR1P0CX74 440 aa8.33□□□□□ -1.08
YKR040CYKR040C TY1A-LR3P0CX75 440 aa8.33□□□□□ -1.08
YKR040CYKR040C TY1A-ML2P0CX76 440 aa8.33□□□□□ -1.08
YKR040CYKR040C CNB1P25296 175 aa8.33□□□□□ -1.08
YKR040CYKR040C ZRT1P32804 376 aa8.33□□□□□ -1.08
YKR040CYKR040C YPT53P36019 220 aa8.33□□□□□ -1.08
YKR040CYKR040C SPC1P46965 94 aa8.33□□□□□ -1.08
YKR040CYKR040C GTO3Q04806 366 aa8.33□□□□□ -1.08
YKR040CYKR040C DGA1Q08650 418 aa8.33□□□□□ -1.08
YKR040CYKR040C TY1A-GR1Q12085 440 aa8.33□□□□□ -1.08
YKR040CYKR040C TY1A-PR3Q6Q5H1 440 aaKnown RBP8.33□□□□□ -1.08
YKR040CYKR040C TY1A-OLQ92392 440 aaKnown RBP8.33□□□□□ -1.08
YKR040CYKR040C PAU15P40585 124 aa8.32□□□□□ -1.08
YKR040CYKR040C TVP18Q04767 167 aa8.32□□□□□ -1.08
YKR040CYKR040C POM33Q12164 279 aa8.32□□□□□ -1.08
YKR040CYKR040C TEM1P38987 245 aa8.31□□□□□ -1.08
YKR040CYKR040C KTI12P34253 313 aaKnown RBP8.29□□□□□ -1.08
YKR040CYKR040C CDC40P40968 455 aaPredicted RBP8.29□□□□□ -1.08
YKR040CYKR040C DAN1P47178 298 aa8.29□□□□□ -1.08
YKR040CYKR040C SNU23Q12368 194 aaPredicted RBP8.29□□□□□ -1.08
YKR040CYKR040C SDS23P53172 527 aa8.28□□□□□ -1.08
YKR040CYKR040C RPL42AP0CX27 106 aaKnown RBP8.27□□□□□ -1.09
YKR040CYKR040C RPL42BP0CX28 106 aaKnown RBP8.27□□□□□ -1.09
YKR040CYKR040C SDH8P38345 138 aa8.27□□□□□ -1.09
YKR040CYKR040C PMP3P87284 55 aa8.27□□□□□ -1.09
YKR040CYKR040C YGR149WP48236 432 aa8.26□□□□□ -1.09
YKR040CYKR040C DPP1Q05521 289 aa8.26□□□□□ -1.09
YKR040CYKR040C RPL23AP0CX41 137 aaKnown RBP8.25□□□□□ -1.09
YKR040CYKR040C RPL23BP0CX42 137 aaKnown RBP8.25□□□□□ -1.09
YKR040CYKR040C PBA1Q05778 276 aa8.24□□□□□ -1.09
YKR040CYKR040C YPR195CQ06594 109 aa8.24□□□□□ -1.09
YKR040CYKR040C UBC5P15732 148 aa8.23□□□□□ -1.09
YKR040CYKR040C YJL028WP47062 111 aa8.23□□□□□ -1.09
YKR040CYKR040C ERI1P62651 68 aaKnown RBP8.23□□□□□ -1.09
YKR040CYKR040C FSF1Q12029 327 aaKnown RBP8.23□□□□□ -1.09
YKR040CYKR040C YKR032WP36127 104 aa8.22□□□□□ -1.09
YKR040CYKR040C WIP1Q2V2P8 89 aa8.22□□□□□ -1.09
YKR040CYKR040C YLL066W-BQ8TGJ7 56 aa8.22□□□□□ -1.09
YKR040CYKR040C RPL11AP0C0W9 174 aaKnown RBP8.21□□□□□ -1.1
YKR040CYKR040C YBR013CP38215 129 aa8.21□□□□□ -1.1
YKR040CYKR040C DCV1P43595 202 aa8.21□□□□□ -1.1
YKR040CYKR040C ZEO1Q08245 113 aa8.21□□□□□ -1.1
YKR040CYKR040C RPL11BQ3E757 174 aaPredicted RBP8.21□□□□□ -1.1
YKR040CYKR040C RTC6O14464 93 aa8.2□□□□□ -1.1
YKR040CYKR040C YNL200CP40165 246 aaKnown RBP8.2□□□□□ -1.1
YKR040CYKR040C GAT4P40569 121 aa8.2□□□□□ -1.1
YKR040CYKR040C YMR122W-AQ3E842 84 aa8.2□□□□□ -1.1
YKR040CYKR040C RPL33AP05744 107 aaKnown RBP8.19□□□□□ -1.1
YKR040CYKR040C RPL33BP41056 107 aaKnown RBP8.19□□□□□ -1.1
YKR040CYKR040C NSE4P43124 402 aa8.19□□□□□ -1.1
YKR040CYKR040C HHO1P53551 258 aa8.19□□□□□ -1.1
YKR040CYKR040C RPS22BQ3E7Y3 130 aaKnown RBP8.19□□□□□ -1.1
YKR040CYKR040C SAL1D6W196 494 aa8.18□□□□□ -1.1
YKR040CYKR040C PAU19P0CE85 124 aa8.18□□□□□ -1.1
YKR040CYKR040C PAU21P0CE86 164 aa8.18□□□□□ -1.1
YKR040CYKR040C PAU22P0CE87 164 aa8.18□□□□□ -1.1
YKR040CYKR040C PAU3P25610 124 aa8.18□□□□□ -1.1
YKR040CYKR040C ARC15P40518 154 aaRIP-Chip data8.17□□□□□ -1.1not detected
YKR040CYKR040C YCR024C-BQ3E7Z8 88 aa8.17□□□□□ -1.1
YKR040CYKR040C SEC4P07560 215 aaKnown RBP8.16□□□□□ -1.1
YKR040CYKR040C SVP26P38869 228 aa8.16□□□□□ -1.1
YKR040CYKR040C PET8P38921 284 aa8.16□□□□□ -1.1
YKR040CYKR040C GLO1P50107 326 aa8.16□□□□□ -1.1
YKR040CYKR040C DIF1O13577 133 aa8.15□□□□□ -1.1
YKR040CYKR040C POR1P04840 283 aaKnown RBP8.15□□□□□ -1.1
YKR040CYKR040C ANB1P19211 157 aa8.15□□□□□ -1.1
YKR040CYKR040C MRP49P32388 137 aa8.15□□□□□ -1.1
YKR040CYKR040C YKR070WP36151 352 aaKnown RBP8.15□□□□□ -1.1
YKR040CYKR040C VTS1Q08831 523 aaKnown RBP RIP-Chip data8.14□□□□□ -1.11not detected
YKR040CYKR040C YPR010C-AA5Z2X5 72 aa8.13□□□□□ -1.11
YKR040CYKR040C YBR209WP38311 105 aa8.13□□□□□ -1.11
YKR040CYKR040C YIL059CP40520 121 aa8.13□□□□□ -1.11
YKR040CYKR040C RRT15Q3E811 62 aa8.13□□□□□ -1.11
YKR040CYKR040C PFY1P07274 126 aa8.12□□□□□ -1.11
YKR040CYKR040C YER076CP40049 302 aa8.12□□□□□ -1.11
YKR040CYKR040C GTT1P40582 234 aa8.12□□□□□ -1.11
YKR040CYKR040C YMR320WQ04897 101 aa8.12□□□□□ -1.11
YKR040CYKR040C YPR014CQ6B0W2 109 aa8.11□□□□□ -1.11
YKR040CYKR040C YGL088WP53151 121 aa8.1□□□□□ -1.11
YKR040CYKR040C GIS2P53849 153 aaKnown RBP RIP-Chip data8.1□□□□□ -1.11not detected
YKR040CYKR040C YDR115WQ04598 105 aa8.1□□□□□ -1.11
YKR040CYKR040C FCF1Q05498 189 aaPredicted RBP8.1□□□□□ -1.11
YKR040CYKR040C ERG28P40030 148 aa8.09□□□□□ -1.11
YKR040CYKR040C MGR2Q02889 113 aa8.09□□□□□ -1.11
YKR040CYKR040C RPL16AP26784 199 aaKnown RBP8.08□□□□□ -1.12
YKR040CYKR040C AIM29P36154 155 aa8.08□□□□□ -1.12
YKR040CYKR040C YIL014C-AQ02598 104 aa8.08□□□□□ -1.12
YKR040CYKR040C ADH2P00331 348 aaKnown RBP8.07□□□□□ -1.12
YKR040CYKR040C SEC72P39742 193 aaKnown RBP8.07□□□□□ -1.12
YKR040CYKR040C CYT2Q00873 224 aa8.07□□□□□ -1.12
YKR040CYKR040C PRE1P22141 198 aaKnown RBP8.06□□□□□ -1.12
YKR040CYKR040C YJR146WP47174 117 aa8.06□□□□□ -1.12
YKR040CYKR040C ERG27Q12452 347 aaKnown RBP8.06□□□□□ -1.12
YKR040CYKR040C YOR008C-AQ3E7B9 74 aa8.06□□□□□ -1.12
YKR040CYKR040C AQY1P0CD91 305 aa8.05□□□□□ -1.12
YKR040CYKR040C LCL2Q08045 131 aa8.05□□□□□ -1.12
YKR040CYKR040C TRP1P00912 224 aa8.04□□□□□ -1.12
YKR040CYKR040C TOS6P48560 102 aa8.04□□□□□ -1.12
YKR040CYKR040C YGL118CP53132 145 aa8.04□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms