RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C SEN2P16658 377 aa1.25□□□□□ -2.21
SHE2YKL130C SUA7P29055 345 aaPredicted RBP1.25□□□□□ -2.21
SHE2YKL130C AHT1P29589 182 aa1.25□□□□□ -2.21
SHE2YKL130C SUI1P32911 108 aaKnown RBP1.25□□□□□ -2.21
SHE2YKL130C ETR1P38071 380 aa1.25□□□□□ -2.21
SHE2YKL130C FMN1Q03778 218 aa1.25□□□□□ -2.21
SHE2YKL130C YMR252CQ04814 134 aa1.25□□□□□ -2.21
SHE2YKL130C YDL241WQ07738 123 aa1.25□□□□□ -2.21
SHE2YKL130C YLR361C-AQ3E795 98 aa1.25□□□□□ -2.21
SHE2YKL130C SCS22Q6Q595 175 aa1.25□□□□□ -2.21
SHE2YKL130C YOR032W-AQ8TGS1 66 aa1.25□□□□□ -2.21
SHE2YKL130C ACC1Q00955 2233 aaKnown RBP1.25□□□□□ -2.21
SHE2YKL130C YGL041W-AP0C5N3 154 aa1.24□□□□□ -2.21
SHE2YKL130C APS3P47064 194 aa1.24□□□□□ -2.21
SHE2YKL130C SPG1P50088 95 aa1.24□□□□□ -2.21
SHE2YKL130C RCF2P53721 224 aa1.24□□□□□ -2.21
SHE2YKL130C YDR278CQ05612 105 aa1.24□□□□□ -2.21
SHE2YKL130C NMA1Q06178 401 aaKnown RBP1.24□□□□□ -2.21
SHE2YKL130C KEI1Q06346 221 aa1.24□□□□□ -2.21
SHE2YKL130C SPC3Q12133 184 aa1.24□□□□□ -2.21
SHE2YKL130C YOR097CQ12274 175 aaPredicted RBP1.24□□□□□ -2.21
SHE2YKL130C LAA1P39526 2014 aa1.23□□□□□ -2.21
SHE2YKL130C PRS3P38689 320 aaKnown RBP1.23□□□□□ -2.21
SHE2YKL130C YIL086CP40503 102 aa1.23□□□□□ -2.21
SHE2YKL130C VMA10P48836 114 aaKnown RBP1.23□□□□□ -2.21
SHE2YKL130C YNL019CP53975 284 aa1.23□□□□□ -2.21
SHE2YKL130C DYN2Q02647 92 aa1.23□□□□□ -2.21
SHE2YKL130C IRC19Q07843 230 aa1.23□□□□□ -2.21
SHE2YKL130C FCY1Q12178 158 aa1.23□□□□□ -2.21
SHE2YKL130C GCN1P33892 2672 aaKnown RBP1.22□□□□□ -2.21
SHE2YKL130C NMT1P14743 455 aa1.22□□□□□ -2.21
SHE2YKL130C RPS20P38701 121 aaKnown RBP1.22□□□□□ -2.21
SHE2YKL130C YHR140WP38842 239 aa1.22□□□□□ -2.21
SHE2YKL130C YEL008WP40001 126 aa1.22□□□□□ -2.21
SHE2YKL130C YFL065CP43539 102 aa1.22□□□□□ -2.21
SHE2YKL130C LSM8P47093 109 aaKnown RBP1.22□□□□□ -2.21
SHE2YKL130C RPS12P48589 143 aaKnown RBP1.22□□□□□ -2.21
SHE2YKL130C YGR017WP53210 297 aa1.22□□□□□ -2.21
SHE2YKL130C CNL1Q06333 122 aa1.22□□□□□ -2.21
SHE2YKL130C OCA6Q12454 224 aa1.22□□□□□ -2.21
SHE2YKL130C COA3Q3E7B2 85 aa1.22□□□□□ -2.21
SHE2YKL130C TAR1Q8TGM6 124 aa1.22□□□□□ -2.21
SHE2YKL130C YSF3P0C074 85 aaPredicted RBP1.21□□□□□ -2.22
SHE2YKL130C YFR010W-AP0C5N0 62 aa1.21□□□□□ -2.22
SHE2YKL130C NHP6AP11632 93 aaKnown RBP1.21□□□□□ -2.22
SHE2YKL130C PRE1P22141 198 aaKnown RBP1.21□□□□□ -2.22
SHE2YKL130C YCR099CP25657 155 aa1.21□□□□□ -2.22
SHE2YKL130C YBR242WP38331 238 aa1.21□□□□□ -2.22
SHE2YKL130C YEL014CP39999 101 aa1.21□□□□□ -2.22
SHE2YKL130C GLC8P41818 229 aa1.21□□□□□ -2.22
SHE2YKL130C DIE2P50076 525 aa1.21□□□□□ -2.22
SHE2YKL130C RPL22BP56628 122 aaKnown RBP1.21□□□□□ -2.22
SHE2YKL130C YNL277W-AQ3E7Z0 62 aa1.21□□□□□ -2.22
SHE2YKL130C BRR2P32639 2163 aaKnown RBP1.2□□□□□ -2.22
SHE2YKL130C FMP49A0A023PZB3 126 aa1.2□□□□□ -2.22
SHE2YKL130C CDC39P25655 2108 aaKnown RBP1.2□□□□□ -2.22
SHE2YKL130C RPL14AP36105 138 aaKnown RBP1.2□□□□□ -2.22
SHE2YKL130C ECM31P38122 312 aa1.2□□□□□ -2.22
SHE2YKL130C RPL14BP38754 138 aaKnown RBP1.2□□□□□ -2.22
SHE2YKL130C YGL230CP53074 147 aa1.2□□□□□ -2.22
SHE2YKL130C AVO2Q04749 426 aa1.2□□□□□ -2.22
SHE2YKL130C YPR153WQ06537 140 aa1.2□□□□□ -2.22
SHE2YKL130C PRP8P33334 2413 aaKnown RBP1.19□□□□□ -2.22
SHE2YKL130C YHR214C-DP0CX93 97 aa1.19□□□□□ -2.22
SHE2YKL130C RPS1BP23248 255 aaKnown RBP1.19□□□□□ -2.22
SHE2YKL130C RPS27AP35997 82 aaKnown RBP1.19□□□□□ -2.22
SHE2YKL130C RPS27BP38711 82 aa1.19□□□□□ -2.22
SHE2YKL130C HPM1P40481 377 aa1.19□□□□□ -2.22
SHE2YKL130C YCL001W-AP87012 153 aa1.19□□□□□ -2.22
SHE2YKL130C ELC1Q03071 99 aa1.19□□□□□ -2.22
SHE2YKL130C RAF1Q06891 181 aa1.19□□□□□ -2.22
SHE2YKL130C HUT1Q12520 339 aa1.19□□□□□ -2.22
SHE2YKL130C SLO1Q3E784 85 aa1.19□□□□□ -2.22
SHE2YKL130C CMC4Q3E7A9 73 aa1.19□□□□□ -2.22
SHE2YKL130C MHF1Q3E835 90 aa1.19□□□□□ -2.22
SHE2YKL130C Q0144Q9ZZW2 109 aa1.19□□□□□ -2.22
SHE2YKL130C HYM1P32464 399 aa1.18□□□□□ -2.22
SHE2YKL130C HSP150P32478 413 aa1.18□□□□□ -2.22
SHE2YKL130C RPS1AP33442 255 aaKnown RBP1.18□□□□□ -2.22
SHE2YKL130C MIX14Q04341 121 aa1.18□□□□□ -2.22
SHE2YKL130C SDH7Q04401 133 aa1.18□□□□□ -2.22
SHE2YKL130C SOM1Q05676 74 aa1.18□□□□□ -2.22
SHE2YKL130C GPI11Q06636 219 aa1.18□□□□□ -2.22
SHE2YKL130C UTP20P35194 2493 aaKnown RBP1.17□□□□□ -2.22
SHE2YKL130C COX5BP00425 151 aa1.17□□□□□ -2.22
SHE2YKL130C KIN28P06242 306 aa1.17□□□□□ -2.22
SHE2YKL130C MRPL44P19956 98 aa1.17□□□□□ -2.22
SHE2YKL130C HYP2P23301 157 aaKnown RBP1.17□□□□□ -2.22
SHE2YKL130C FYV5P25585 152 aa1.17□□□□□ -2.22
SHE2YKL130C YCR050CP25630 102 aa1.17□□□□□ -2.22
SHE2YKL130C MRP49P32388 137 aa1.17□□□□□ -2.22
SHE2YKL130C IPT1P38954 527 aa1.17□□□□□ -2.22
SHE2YKL130C MPC1P53157 130 aaKnown RBP1.17□□□□□ -2.22
SHE2YKL130C FIT1Q04433 528 aa1.17□□□□□ -2.22
SHE2YKL130C TVP18Q04767 167 aa1.17□□□□□ -2.22
SHE2YKL130C NAT5Q08689 176 aa1.17□□□□□ -2.22
SHE2YKL130C YOR385WQ08909 290 aa1.17□□□□□ -2.22
SHE2YKL130C YPR203WQ08994 102 aa1.17□□□□□ -2.22
SHE2YKL130C MEC1P38111 2368 aa1.16□□□□□ -2.22
SHE2YKL130C CCW14O13547 238 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms