RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W RPL36BO14455 100 aaKnown RBP0.79□□□□□ -2.28
RPL40AYIL148W RPL36AP05745 100 aaPredicted RBP0.79□□□□□ -2.28
RPL40AYIL148W BUD23P25627 275 aaPredicted RBP0.79□□□□□ -2.28
RPL40AYIL148W YKL044WP36092 106 aa0.79□□□□□ -2.28
RPL40AYIL148W QCR10P37299 77 aa0.79□□□□□ -2.28
RPL40AYIL148W YBR090CP38253 122 aa0.79□□□□□ -2.28
RPL40AYIL148W LST8P41318 303 aa0.79□□□□□ -2.28
RPL40AYIL148W NHP10Q03435 203 aa0.79□□□□□ -2.28
RPL40AYIL148W YMR090WQ04304 227 aaKnown RBP0.79□□□□□ -2.28
RPL40AYIL148W DAD1Q12248 94 aa0.79□□□□□ -2.28
RPL40AYIL148W YOR097CQ12274 175 aaPredicted RBP0.79□□□□□ -2.28
RPL40AYIL148W OCA6Q12454 224 aa0.79□□□□□ -2.28
RPL40AYIL148W TOP2P06786 1428 aaKnown RBP0.79□□□□□ -2.28
RPL40AYIL148W YER039C-AP0CD97 72 aa0.78□□□□□ -2.28
RPL40AYIL148W PAU21P0CE86 164 aa0.78□□□□□ -2.28
RPL40AYIL148W PAU22P0CE87 164 aa0.78□□□□□ -2.28
RPL40AYIL148W YEA6P39953 335 aa0.78□□□□□ -2.28
RPL40AYIL148W GAT4P40569 121 aa0.78□□□□□ -2.28
RPL40AYIL148W GTT1P40582 234 aa0.78□□□□□ -2.28
RPL40AYIL148W YGR164WP53291 111 aa0.78□□□□□ -2.28
RPL40AYIL148W YPL067CQ02754 198 aa0.78□□□□□ -2.28
RPL40AYIL148W HPA2Q06592 156 aa0.78□□□□□ -2.28
RPL40AYIL148W CAT8P39113 1433 aa0.78□□□□□ -2.28
RPL40AYIL148W TSC11P40061 1430 aa0.78□□□□□ -2.28
RPL40AYIL148W TRS20P38334 175 aa0.77□□□□□ -2.29
RPL40AYIL148W YHR130CP38834 111 aa0.77□□□□□ -2.29
RPL40AYIL148W AIM18P38884 321 aa0.77□□□□□ -2.29
RPL40AYIL148W HHY1P39982 102 aa0.77□□□□□ -2.29
RPL40AYIL148W YMR103CQ04436 120 aa0.77□□□□□ -2.29
RPL40AYIL148W YPL261CQ08976 102 aa0.77□□□□□ -2.29
RPL40AYIL148W GTT2Q12390 233 aa0.77□□□□□ -2.29
RPL40AYIL148W YOS1Q3E834 85 aa0.77□□□□□ -2.29
RPL40AYIL148W SUS1Q6WNK7 96 aa0.77□□□□□ -2.29
RPL40AYIL148W YLR365WQ7LIF2 110 aa0.77□□□□□ -2.29
RPL40AYIL148W KRE5P22023 1365 aa0.77□□□□□ -2.29
RPL40AYIL148W GEA2P39993 1459 aaKnown RBP0.77□□□□□ -2.29
RPL40AYIL148W EMC5P40540 141 aa0.76□□□□□ -2.29
RPL40AYIL148W HUR1P45820 110 aa0.76□□□□□ -2.29
RPL40AYIL148W SNN1P48232 102 aa0.76□□□□□ -2.29
RPL40AYIL148W RPL22BP56628 122 aaKnown RBP0.76□□□□□ -2.29
RPL40AYIL148W COA4Q05809 96 aa0.76□□□□□ -2.29
RPL40AYIL148W YLR296WQ05898 108 aa0.76□□□□□ -2.29
RPL40AYIL148W YLR363W-AQ3E747 85 aa0.76□□□□□ -2.29
RPL40AYIL148W YOR376W-AQ3E805 51 aa0.76□□□□□ -2.29
RPL40AYIL148W PDR11P40550 1411 aa0.75□□□□□ -2.29
RPL40AYIL148W UBC5P15732 148 aa0.75□□□□□ -2.29
RPL40AYIL148W YHR138CP38841 114 aaPredicted RBP0.75□□□□□ -2.29
RPL40AYIL148W GCV3P39726 170 aaPredicted RBP0.75□□□□□ -2.29
RPL40AYIL148W SNU13P39990 126 aaKnown RBP0.75□□□□□ -2.29
RPL40AYIL148W YER187WP40102 141 aa0.75□□□□□ -2.29
RPL40AYIL148W YMR141CP40211 102 aa0.75□□□□□ -2.29
RPL40AYIL148W MSL1P40567 111 aaPredicted RBP0.75□□□□□ -2.29
RPL40AYIL148W YFR035CP43608 114 aa0.75□□□□□ -2.29
RPL40AYIL148W YIL014C-AQ02598 104 aa0.75□□□□□ -2.29
RPL40AYIL148W FIT3Q08907 204 aa0.75□□□□□ -2.29
RPL40AYIL148W YDR029WQ12111 104 aa0.75□□□□□ -2.29
RPL40AYIL148W MHF2Q3E829 80 aa0.75□□□□□ -2.29
RPL40AYIL148W PCC1Q3E833 88 aa0.75□□□□□ -2.29
RPL40AYIL148W OST5Q92316 86 aa0.75□□□□□ -2.29
RPL40AYIL148W REV3P14284 1504 aa0.74□□□□□ -2.29
RPL40AYIL148W SSN2P38931 1420 aa0.74□□□□□ -2.29
RPL40AYIL148W GEA1P47102 1408 aaPredicted RBP0.74□□□□□ -2.29
RPL40AYIL148W BUD4P47136 1447 aa0.74□□□□□ -2.29
RPL40AYIL148W RSF2P46974 1380 aa0.74□□□□□ -2.29
RPL40AYIL148W ECM12O13529 151 aa0.74□□□□□ -2.29
RPL40AYIL148W PAU19P0CE85 124 aa0.74□□□□□ -2.29
RPL40AYIL148W UBC4P15731 148 aa0.74□□□□□ -2.29
RPL40AYIL148W PAU3P25610 124 aa0.74□□□□□ -2.29
RPL40AYIL148W SRX1P36077 127 aa0.74□□□□□ -2.29
RPL40AYIL148W CYB5P40312 120 aa0.74□□□□□ -2.29
RPL40AYIL148W RSM19P53733 91 aaPredicted RBP0.74□□□□□ -2.29
RPL40AYIL148W SNA2P56508 79 aa0.74□□□□□ -2.29
RPL40AYIL148W PRM3Q08931 133 aa0.74□□□□□ -2.29
RPL40AYIL148W YCR075W-AQ3E830 75 aa0.74□□□□□ -2.29
RPL40AYIL148W TRM732Q03496 1420 aa0.73□□□□□ -2.29
RPL40AYIL148W LYS2P07702 1392 aa0.73□□□□□ -2.29
RPL40AYIL148W RPL22AP05749 121 aaKnown RBP0.73□□□□□ -2.29
RPL40AYIL148W RPL40AP0CH08 128 aaKnown RBP0.73□□□□□ -2.29
RPL40AYIL148W RPL40BP0CH09 128 aaKnown RBP0.73□□□□□ -2.29
RPL40AYIL148W HMRA1P0CY11 126 aa0.73□□□□□ -2.29
RPL40AYIL148W HMRA2P0CY13 119 aa0.73□□□□□ -2.29
RPL40AYIL148W EMP24P32803 203 aaKnown RBP0.73□□□□□ -2.29
RPL40AYIL148W PAU15P40585 124 aa0.73□□□□□ -2.29
RPL40AYIL148W PAU12P53343 120 aa0.73□□□□□ -2.29
RPL40AYIL148W MIX14Q04341 121 aa0.73□□□□□ -2.29
RPL40AYIL148W YLR194CQ05777 254 aa0.73□□□□□ -2.29
RPL40AYIL148W YGL194C-AQ2V2P6 80 aa0.73□□□□□ -2.29
RPL40AYIL148W MIC10Q96VH5 97 aa0.73□□□□□ -2.29
RPL40AYIL148W ENV10Q99382 181 aa0.73□□□□□ -2.29
RPL40AYIL148W RTC6O14464 93 aa0.72□□□□□ -2.29
RPL40AYIL148W PAU2P32612 120 aa0.72□□□□□ -2.29
RPL40AYIL148W PAU16P35994 123 aa0.72□□□□□ -2.29
RPL40AYIL148W COX23P38824 151 aa0.72□□□□□ -2.29
RPL40AYIL148W YMR321CQ04898 105 aa0.72□□□□□ -2.29
RPL40AYIL148W LSM6Q06406 86 aaKnown RBP0.72□□□□□ -2.29
RPL40AYIL148W YOL118CQ08259 102 aa0.72□□□□□ -2.29
RPL40AYIL148W SCP1Q08873 200 aa0.72□□□□□ -2.29
RPL40AYIL148W YGL041C-BQ3E750 60 aa0.72□□□□□ -2.29
RPL40AYIL148W YCR095W-AQ3E787 52 aa0.72□□□□□ -2.29
RPL40AYIL148W YKL068W-AQ3E826 78 aa0.72□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 87 ms