RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W YIL059CP40520 121 aa2.6□□□□□ -1.99
CAF130YGR134W PAU12P53343 120 aa2.6□□□□□ -1.99
CAF130YGR134W FZF1P32805 299 aa2.6□□□□□ -1.99
CAF130YGR134W TDA2P40045 126 aa2.6□□□□□ -1.99
CAF130YGR134W EMC4P53073 190 aa2.6□□□□□ -1.99
CAF130YGR134W RAD28Q12021 506 aa2.6□□□□□ -1.99
CAF130YGR134W BPH1P25356 2167 aa2.6□□□□□ -1.99
CAF130YGR134W SWM2P40342 146 aa2.6□□□□□ -1.99
CAF130YGR134W THG1P53215 237 aaKnown RBP2.6□□□□□ -1.99
CAF130YGR134W SHH3Q04487 196 aa2.6□□□□□ -1.99
CAF130YGR134W SWC7Q06707 132 aa2.6□□□□□ -1.99
CAF130YGR134W UTR5P32630 166 aa2.59□□□□□ -1.99
CAF130YGR134W PAM17P36147 197 aa2.59□□□□□ -1.99
CAF130YGR134W ECM34P38728 170 aa2.59□□□□□ -1.99
CAF130YGR134W DSK2P48510 373 aa2.59□□□□□ -1.99
CAF130YGR134W RCE1Q03530 315 aa2.59□□□□□ -1.99
CAF130YGR134W ADH3P07246 375 aaKnown RBP2.59□□□□□ -2
CAF130YGR134W SNU13P39990 126 aaKnown RBP2.59□□□□□ -2
CAF130YGR134W YPI1P43587 155 aa2.59□□□□□ -2
CAF130YGR134W UPS1Q05776 175 aa2.59□□□□□ -2
CAF130YGR134W YOL131WQ08270 108 aa2.58□□□□□ -2
CAF130YGR134W YOR097CQ12274 175 aaPredicted RBP2.58□□□□□ -2
CAF130YGR134W SLH1P53327 1967 aaKnown RBP2.58□□□□□ -2
CAF130YGR134W FYV5P25585 152 aa2.58□□□□□ -2
CAF130YGR134W CLB6P32943 380 aa2.58□□□□□ -2
CAF130YGR134W YEA6P39953 335 aa2.58□□□□□ -2
CAF130YGR134W MRPS8Q03799 155 aa2.58□□□□□ -2
CAF130YGR134W IRC19Q07843 230 aa2.58□□□□□ -2
CAF130YGR134W MSB2P32334 1306 aa2.58□□□□□ -2
CAF130YGR134W TMA19P35691 167 aaKnown RBP2.58□□□□□ -2
CAF130YGR134W YHP1Q04116 353 aa2.58□□□□□ -2
CAF130YGR134W RRT15Q3E811 62 aa2.58□□□□□ -2
CAF130YGR134W STT4P37297 1900 aa2.57□□□□□ -2
CAF130YGR134W COX9P07255 59 aa2.57□□□□□ -2
CAF130YGR134W YCR099CP25657 155 aa2.57□□□□□ -2
CAF130YGR134W MPC1P53157 130 aaKnown RBP2.57□□□□□ -2
CAF130YGR134W LIP1Q03579 150 aa2.57□□□□□ -2
CAF130YGR134W IRC23Q08416 157 aa2.57□□□□□ -2
CAF130YGR134W RAD6P06104 172 aa2.57□□□□□ -2
CAF130YGR134W UBC5P15732 148 aa2.57□□□□□ -2
CAF130YGR134W SCM4P32564 187 aa2.57□□□□□ -2
CAF130YGR134W PAU2P32612 120 aa2.57□□□□□ -2
CAF130YGR134W SFT2P38166 215 aa2.57□□□□□ -2
CAF130YGR134W YGL149WP53116 101 aa2.57□□□□□ -2
CAF130YGR134W DAD4P69851 72 aa2.57□□□□□ -2
CAF130YGR134W KTI11Q3E840 82 aa2.57□□□□□ -2
CAF130YGR134W LSM8P47093 109 aaKnown RBP2.57□□□□□ -2
CAF130YGR134W YJR146WP47174 117 aa2.57□□□□□ -2
CAF130YGR134W COA4Q05809 96 aa2.57□□□□□ -2
CAF130YGR134W FEX1Q08913 375 aa2.57□□□□□ -2
CAF130YGR134W MIC10Q96VH5 97 aa2.57□□□□□ -2
CAF130YGR134W GPI19Q04082 140 aa2.56□□□□□ -2
CAF130YGR134W RPL40AP0CH08 128 aaKnown RBP2.56□□□□□ -2
CAF130YGR134W RPL40BP0CH09 128 aaKnown RBP2.56□□□□□ -2
CAF130YGR134W YGL010WP25338 174 aa2.56□□□□□ -2
CAF130YGR134W PAU24P38155 120 aa2.56□□□□□ -2
CAF130YGR134W YBR090CP38253 122 aa2.56□□□□□ -2
CAF130YGR134W GNA1P43577 159 aaPredicted RBP2.56□□□□□ -2
CAF130YGR134W POP3P53833 195 aaPredicted RBP2.56□□□□□ -2
CAF130YGR134W FEX2Q08991 375 aa2.56□□□□□ -2
CAF130YGR134W MRPL11P36521 249 aaPredicted RBP2.55□□□□□ -2
CAF130YGR134W FLX1P40464 311 aa2.55□□□□□ -2
CAF130YGR134W KNH1P50112 268 aa2.55□□□□□ -2
CAF130YGR134W YDR029WQ12111 104 aa2.55□□□□□ -2
CAF130YGR134W SUS1Q6WNK7 96 aa2.55□□□□□ -2
CAF130YGR134W TIR3P40552 269 aa2.55□□□□□ -2
CAF130YGR134W YIL014C-AQ02598 104 aa2.55□□□□□ -2
CAF130YGR134W HMRA1P0CY11 126 aa2.55□□□□□ -2
CAF130YGR134W PRE1P22141 198 aaKnown RBP2.55□□□□□ -2
CAF130YGR134W YIR035CP40579 254 aa2.55□□□□□ -2
CAF130YGR134W CMC4Q3E7A9 73 aa2.55□□□□□ -2
CAF130YGR134W RPS23AP0CX29 145 aaKnown RBP2.54□□□□□ -2
CAF130YGR134W RPS23BP0CX30 145 aa2.54□□□□□ -2
CAF130YGR134W YGR026WP53217 278 aa2.54□□□□□ -2
CAF130YGR134W ATG41Q12048 136 aa2.54□□□□□ -2
CAF130YGR134W EMP24P32803 203 aaKnown RBP2.54□□□□□ -2
CAF130YGR134W HPA3P39979 161 aa2.54□□□□□ -2
CAF130YGR134W ERV14P53173 138 aa2.54□□□□□ -2
CAF130YGR134W MDM35O60200 86 aa2.53□□□□□ -2
CAF130YGR134W ECM31P38122 312 aa2.53□□□□□ -2
CAF130YGR134W SOM1Q05676 74 aa2.53□□□□□ -2
CAF130YGR134W YLR236CA0A023PZG4 107 aa2.53□□□□□ -2
CAF130YGR134W GTT1P40582 234 aa2.53□□□□□ -2
CAF130YGR134W RSM19P53733 91 aaPredicted RBP2.53□□□□□ -2
CAF130YGR134W ELP6Q04868 273 aa2.53□□□□□ -2
CAF130YGR134W YFR035CP43608 114 aa2.53□□□□□ -2
CAF130YGR134W RPL26AP05743 127 aaKnown RBP2.52□□□□□ -2.01
CAF130YGR134W AGA2P32781 87 aa2.52□□□□□ -2.01
CAF130YGR134W QCR10P37299 77 aa2.52□□□□□ -2.01
CAF130YGR134W RPL26BP53221 127 aaKnown RBP2.52□□□□□ -2.01
CAF130YGR134W YLR365WQ7LIF2 110 aa2.52□□□□□ -2.01
CAF130YGR134W ATG40Q99325 256 aa2.52□□□□□ -2.01
CAF130YGR134W YHL018WP38744 120 aaPredicted RBP2.52□□□□□ -2.01
CAF130YGR134W GRX5Q02784 150 aa2.52□□□□□ -2.01
CAF130YGR134W KEI1Q06346 221 aa2.52□□□□□ -2.01
CAF130YGR134W VPS68Q12016 184 aa2.52□□□□□ -2.01
CAF130YGR134W KSH1Q8TGJ3 72 aa2.51□□□□□ -2.01
CAF130YGR134W CYR1P08678 2026 aaKnown RBP2.51□□□□□ -2.01
CAF130YGR134W FAB1P34756 2278 aa2.51□□□□□ -2.01
CAF130YGR134W PEX4P29340 183 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms