RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C INO2P26798 304 aa5.09□□□□□ -1.59
YPT1YFL038C MRPL49P40858 161 aaPredicted RBP5.09□□□□□ -1.59
YPT1YFL038C YNL092WP53934 400 aa5.09□□□□□ -1.59
YPT1YFL038C DIA1P54005 336 aa5.09□□□□□ -1.59
YPT1YFL038C FCF1Q05498 189 aaPredicted RBP5.09□□□□□ -1.59
YPT1YFL038C YLR363W-AQ3E747 85 aa5.09□□□□□ -1.59
YPT1YFL038C MBF1O14467 151 aaKnown RBP5.08□□□□□ -1.6
YPT1YFL038C MIC26P50087 233 aa5.08□□□□□ -1.6
YPT1YFL038C YDR366CP87287 132 aa5.08□□□□□ -1.6
YPT1YFL038C TMA7Q3E764 64 aaKnown RBP5.08□□□□□ -1.6
YPT1YFL038C SAL1D6W196 494 aa5.07□□□□□ -1.6
YPT1YFL038C AQY1P0CD91 305 aa5.07□□□□□ -1.6
YPT1YFL038C PRE1P22141 198 aaKnown RBP5.07□□□□□ -1.6
YPT1YFL038C YER076CP40049 302 aa5.07□□□□□ -1.6
YPT1YFL038C TOS6P48560 102 aa5.07□□□□□ -1.6
YPT1YFL038C ATP23P53722 227 aa5.07□□□□□ -1.6
YPT1YFL038C YML079WQ03629 201 aa5.07□□□□□ -1.6
YPT1YFL038C YMR103CQ04436 120 aa5.07□□□□□ -1.6
YPT1YFL038C IZH3Q07959 543 aa5.07□□□□□ -1.6
YPT1YFL038C AGA1P32323 725 aa5.06□□□□□ -1.6
YPT1YFL038C KTI12P34253 313 aaKnown RBP5.06□□□□□ -1.6
YPT1YFL038C RPF1P38805 295 aaKnown RBP5.06□□□□□ -1.6
YPT1YFL038C NUP42P49686 430 aaKnown RBP5.06□□□□□ -1.6
YPT1YFL038C YGR025WP53216 100 aa5.06□□□□□ -1.6
YPT1YFL038C YMR181CQ03231 154 aa5.06□□□□□ -1.6
YPT1YFL038C DGA1Q08650 418 aa5.06□□□□□ -1.6
YPT1YFL038C CCW12Q12127 133 aa5.06□□□□□ -1.6
YPT1YFL038C YLR112WQ12130 139 aa5.06□□□□□ -1.6
YPT1YFL038C Q0297Q9ZZV8 51 aa5.06□□□□□ -1.6
YPT1YFL038C PCL2P25693 308 aa5.05□□□□□ -1.6
YPT1YFL038C ELF1P36053 145 aa5.05□□□□□ -1.6
YPT1YFL038C YHR022CP38763 256 aa5.05□□□□□ -1.6
YPT1YFL038C VPS55P47111 140 aa5.05□□□□□ -1.6
YPT1YFL038C SPG4Q04438 115 aa5.05□□□□□ -1.6
YPT1YFL038C YPR013CQ12145 317 aa5.05□□□□□ -1.6
YPT1YFL038C YNL146C-AQ3E7Z1 64 aa5.05□□□□□ -1.6
YPT1YFL038C VAR1P02381 398 aa5.04□□□□□ -1.6
YPT1YFL038C TOS8P53147 276 aa5.04□□□□□ -1.6
YPT1YFL038C YIP3P53633 176 aa5.04□□□□□ -1.6
YPT1YFL038C RPL42AP0CX27 106 aaKnown RBP5.03□□□□□ -1.6
YPT1YFL038C RPL42BP0CX28 106 aaKnown RBP5.03□□□□□ -1.6
YPT1YFL038C YPL073CP40323 161 aa5.03□□□□□ -1.6
YPT1YFL038C KEG1P43614 200 aa5.03□□□□□ -1.6
YPT1YFL038C HOR7Q05827 59 aa5.03□□□□□ -1.6
YPT1YFL038C COA3Q3E7B2 85 aa5.03□□□□□ -1.6
YPT1YFL038C BPH1P25356 2167 aa5.03□□□□□ -1.6
YPT1YFL038C YKL070WP36087 169 aa5.02□□□□□ -1.61
YPT1YFL038C GLO1P50107 326 aa5.02□□□□□ -1.61
YPT1YFL038C PRM7Q12459 698 aa5.02□□□□□ -1.61
YPT1YFL038C DFM1Q12743 341 aaKnown RBP5.02□□□□□ -1.61
YPT1YFL038C YBR200W-AQ3E755 54 aa5.02□□□□□ -1.61
YPT1YFL038C PRP8P33334 2413 aaKnown RBP5.02□□□□□ -1.61
YPT1YFL038C HMRA2P0CY13 119 aa5.01□□□□□ -1.61
YPT1YFL038C SRL1Q08673 210 aa5.01□□□□□ -1.61
YPT1YFL038C YKL023C-AQ2V2P3 75 aa5.01□□□□□ -1.61
YPT1YFL038C YOR008C-AQ3E7B9 74 aa5.01□□□□□ -1.61
YPT1YFL038C YOR011W-AQ3E807 68 aa5.01□□□□□ -1.61
YPT1YFL038C ADH2P00331 348 aaKnown RBP5□□□□□ -1.61
YPT1YFL038C ANB1P19211 157 aa5□□□□□ -1.61
YPT1YFL038C MST28P39552 234 aa5□□□□□ -1.61
YPT1YFL038C YLR296WQ05898 108 aa5□□□□□ -1.61
YPT1YFL038C YIL102C-AQ2V2P5 75 aa5□□□□□ -1.61
YPT1YFL038C YPR053CQ6Q5F3 151 aa5□□□□□ -1.61
YPT1YFL038C YOL085CQ99345 113 aa5□□□□□ -1.61
YPT1YFL038C YER145C-AA0A023PYF4 145 aa4.99□□□□□ -1.61
YPT1YFL038C YER135CP40082 130 aa4.99□□□□□ -1.61
YPT1YFL038C YNL198CP40166 100 aa4.99□□□□□ -1.61
YPT1YFL038C CAX4P53223 239 aa4.99□□□□□ -1.61
YPT1YFL038C ELC1Q03071 99 aa4.99□□□□□ -1.61
YPT1YFL038C PRM3Q08931 133 aa4.99□□□□□ -1.61
YPT1YFL038C YPL261CQ08976 102 aa4.99□□□□□ -1.61
YPT1YFL038C ECM33P38248 429 aaKnown RBP4.98□□□□□ -1.61
YPT1YFL038C URM1P40554 99 aaPredicted RBP4.98□□□□□ -1.61
YPT1YFL038C DCV1P43595 202 aa4.98□□□□□ -1.61
YPT1YFL038C DUO1P53168 247 aaKnown RBP4.98□□□□□ -1.61
YPT1YFL038C RRG8Q06109 277 aa4.98□□□□□ -1.61
YPT1YFL038C URA2P07259 2214 aaKnown RBP4.97□□□□□ -1.61
YPT1YFL038C PAI3P01094 68 aa4.97□□□□□ -1.61
YPT1YFL038C Q0255P03881 472 aa4.97□□□□□ -1.61
YPT1YFL038C YDL022C-AP0C5L6 82 aa4.97□□□□□ -1.61
YPT1YFL038C HYP2P23301 157 aaKnown RBP4.97□□□□□ -1.61
YPT1YFL038C RPL16BP26785 198 aaKnown RBP4.97□□□□□ -1.61
YPT1YFL038C RPB9P27999 122 aa4.97□□□□□ -1.61
YPT1YFL038C PRY2P36110 329 aa4.97□□□□□ -1.61
YPT1YFL038C YKR041WP36134 250 aa4.97□□□□□ -1.61
YPT1YFL038C RPL32P38061 130 aaKnown RBP4.97□□□□□ -1.61
YPT1YFL038C MIG3P39943 394 aa4.97□□□□□ -1.61
YPT1YFL038C YMR244WQ04018 355 aa4.97□□□□□ -1.61
YPT1YFL038C ISU2Q12056 156 aa4.97□□□□□ -1.61
YPT1YFL038C MRPL23Q12487 163 aaPredicted RBP4.97□□□□□ -1.61
YPT1YFL038C RPL15AP05748 204 aaKnown RBP4.96□□□□□ -1.62
YPT1YFL038C RPL43AP0CX25 92 aaKnown RBP4.96□□□□□ -1.62
YPT1YFL038C RPL43BP0CX26 92 aa4.96□□□□□ -1.62
YPT1YFL038C YEL067CP39978 195 aa4.96□□□□□ -1.62
YPT1YFL038C YNR077CP53758 84 aa4.96□□□□□ -1.62
YPT1YFL038C AIM34Q03673 198 aa4.96□□□□□ -1.62
YPT1YFL038C MRPS8Q03799 155 aa4.96□□□□□ -1.62
YPT1YFL038C CCW14O13547 238 aa4.95□□□□□ -1.62
YPT1YFL038C YER181CP40097 107 aa4.95□□□□□ -1.62
YPT1YFL038C YNL217WP40152 326 aa4.95□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms