RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT3	YDR394W	GRH1	Q04410	372 aa	Known RBP	4.71	□□□□□ -1.66
RPT3	YDR394W	IZH3	Q07959	543 aa		4.71	□□□□□ -1.66
RPT3	YDR394W	YPR014C	Q6B0W2	109 aa		4.71	□□□□□ -1.66
RPT3	YDR394W	RPL43A	P0CX25	92 aa	Known RBP	4.7	□□□□□ -1.66
RPT3	YDR394W	RPL43B	P0CX26	92 aa		4.7	□□□□□ -1.66
RPT3	YDR394W	PCL2	P25693	308 aa		4.7	□□□□□ -1.66
RPT3	YDR394W	LCB3	P47013	409 aa		4.7	□□□□□ -1.66
RPT3	YDR394W	VPS55	P47111	140 aa		4.7	□□□□□ -1.66
RPT3	YDR394W	CWC27	Q02770	301 aa		4.7	□□□□□ -1.66
RPT3	YDR394W	MGR2	Q02889	113 aa		4.7	□□□□□ -1.66
RPT3	YDR394W	YDR042C	Q03205	200 aa		4.7	□□□□□ -1.66
RPT3	YDR394W	SPG4	Q04438	115 aa		4.7	□□□□□ -1.66
RPT3	YDR394W	RPL27B	P0C2H7	136 aa	Known RBP	4.69	□□□□□ -1.66
RPT3	YDR394W	MIG1	P27705	504 aa		4.69	□□□□□ -1.66
RPT3	YDR394W	UTR5	P32630	166 aa		4.69	□□□□□ -1.66
RPT3	YDR394W	ELF1	P36053	145 aa		4.69	□□□□□ -1.66
RPT3	YDR394W	YKR032W	P36127	104 aa		4.69	□□□□□ -1.66
RPT3	YDR394W	UIP3	P39547	235 aa		4.69	□□□□□ -1.66
RPT3	YDR394W	MRPL49	P40858	161 aa	Predicted RBP	4.69	□□□□□ -1.66
RPT3	YDR394W	TOS8	P53147	276 aa		4.69	□□□□□ -1.66
RPT3	YDR394W	YGR017W	P53210	297 aa		4.69	□□□□□ -1.66
RPT3	YDR394W	DIA1	P54005	336 aa		4.69	□□□□□ -1.66
RPT3	YDR394W	RPL15B	P54780	204 aa	Predicted RBP	4.69	□□□□□ -1.66
RPT3	YDR394W	YIL014C-A	Q02598	104 aa		4.69	□□□□□ -1.66
RPT3	YDR394W	TVP18	Q04767	167 aa		4.69	□□□□□ -1.66
RPT3	YDR394W	HOR7	Q05827	59 aa		4.69	□□□□□ -1.66
RPT3	YDR394W	ATG39	Q06159	398 aa		4.69	□□□□□ -1.66
RPT3	YDR394W	CCW12	Q12127	133 aa		4.69	□□□□□ -1.66
RPT3	YDR394W	RPL15A	P05748	204 aa	Known RBP	4.68	□□□□□ -1.66
RPT3	YDR394W	YCR023C	P25351	611 aa		4.68	□□□□□ -1.66
RPT3	YDR394W	APS1	P35181	156 aa		4.68	□□□□□ -1.66
RPT3	YDR394W	PET8	P38921	284 aa		4.68	□□□□□ -1.66
RPT3	YDR394W	VPS71	Q03433	280 aa		4.68	□□□□□ -1.66
RPT3	YDR394W	BET5	Q03630	159 aa		4.68	□□□□□ -1.66
RPT3	YDR394W	SRL1	Q08673	210 aa		4.68	□□□□□ -1.66
RPT3	YDR394W	YNL146C-A	Q3E7Z1	64 aa		4.68	□□□□□ -1.66
RPT3	YDR394W	YER145C-A	A0A023PYF4	145 aa		4.67	□□□□□ -1.66
RPT3	YDR394W	PFY1	P07274	126 aa		4.67	□□□□□ -1.66
RPT3	YDR394W	YHR022C	P38763	256 aa		4.67	□□□□□ -1.66
RPT3	YDR394W	YIP3	P53633	176 aa		4.67	□□□□□ -1.66
RPT3	YDR394W	MOT3	P54785	490 aa	Known RBP	4.67	□□□□□ -1.66
RPT3	YDR394W	YMR181C	Q03231	154 aa		4.67	□□□□□ -1.66
RPT3	YDR394W	FCF1	Q05498	189 aa	Predicted RBP	4.67	□□□□□ -1.66
RPT3	YDR394W	RPB9	P27999	122 aa		4.66	□□□□□ -1.66
RPT3	YDR394W	AGA1	P32323	725 aa		4.66	□□□□□ -1.66
RPT3	YDR394W	YKL044W	P36092	106 aa		4.66	□□□□□ -1.66
RPT3	YDR394W	YER076C	P40049	302 aa		4.66	□□□□□ -1.66
RPT3	YDR394W	KEG1	P43614	200 aa		4.66	□□□□□ -1.66
RPT3	YDR394W	TOS6	P48560	102 aa		4.66	□□□□□ -1.66
RPT3	YDR394W	SCS22	Q6Q595	175 aa		4.66	□□□□□ -1.66
RPT3	YDR394W	SAL1	D6W196	494 aa		4.65	□□□□□ -1.67
RPT3	YDR394W	VAR1	P02381	398 aa		4.65	□□□□□ -1.67
RPT3	YDR394W	YKR070W	P36151	352 aa	Known RBP	4.65	□□□□□ -1.67
RPT3	YDR394W	MSC3	Q05812	728 aa		4.65	□□□□□ -1.67
RPT3	YDR394W	RRG8	Q06109	277 aa		4.65	□□□□□ -1.67
RPT3	YDR394W	PRM3	Q08931	133 aa		4.65	□□□□□ -1.67
RPT3	YDR394W	YPR013C	Q12145	317 aa		4.65	□□□□□ -1.67
RPT3	YDR394W	AQY1	P0CD91	305 aa		4.64	□□□□□ -1.67
RPT3	YDR394W	RPL42A	P0CX27	106 aa	Known RBP	4.64	□□□□□ -1.67
RPT3	YDR394W	RPL42B	P0CX28	106 aa	Known RBP	4.64	□□□□□ -1.67
RPT3	YDR394W	MRP49	P32388	137 aa		4.64	□□□□□ -1.67
RPT3	YDR394W	KTI12	P34253	313 aa	Known RBP	4.64	□□□□□ -1.67
RPT3	YDR394W	YGR025W	P53216	100 aa		4.64	□□□□□ -1.67
RPT3	YDR394W	ATP23	P53722	227 aa		4.64	□□□□□ -1.67
RPT3	YDR394W	YML079W	Q03629	201 aa		4.64	□□□□□ -1.67
RPT3	YDR394W	YMR103C	Q04436	120 aa		4.64	□□□□□ -1.67
RPT3	YDR394W	PRM7	Q12459	698 aa		4.64	□□□□□ -1.67
RPT3	YDR394W	BPH1	P25356	2167 aa		4.63	□□□□□ -1.67
RPT3	YDR394W	URA2	P07259	2214 aa	Known RBP	4.63	□□□□□ -1.67
RPT3	YDR394W	PRE1	P22141	198 aa	Known RBP	4.63	□□□□□ -1.67
RPT3	YDR394W	MST28	P39552	234 aa		4.63	□□□□□ -1.67
RPT3	YDR394W	YDR366C	P87287	132 aa		4.63	□□□□□ -1.67
RPT3	YDR394W	MRPL23	Q12487	163 aa	Predicted RBP	4.63	□□□□□ -1.67
RPT3	YDR394W	YLR363W-A	Q3E747	85 aa		4.63	□□□□□ -1.67
RPT3	YDR394W	YBR200W-A	Q3E755	54 aa		4.63	□□□□□ -1.67
RPT3	YDR394W	CAX4	P53223	239 aa		4.62	□□□□□ -1.67
RPT3	YDR394W	YLR112W	Q12130	139 aa		4.62	□□□□□ -1.67
RPT3	YDR394W	YOR011W-A	Q3E807	68 aa		4.62	□□□□□ -1.67
RPT3	YDR394W	YCR041W	P37265	110 aa		4.61	□□□□□ -1.67
RPT3	YDR394W	YER135C	P40082	130 aa		4.61	□□□□□ -1.67
RPT3	YDR394W	MIC26	P50087	233 aa		4.61	□□□□□ -1.67
RPT3	YDR394W	GLO1	P50107	326 aa		4.61	□□□□□ -1.67
RPT3	YDR394W	DGA1	Q08650	418 aa		4.61	□□□□□ -1.67
RPT3	YDR394W	COA3	Q3E7B2	85 aa		4.61	□□□□□ -1.67
RPT3	YDR394W	YPR170W-B	P0C5R9	85 aa		4.6	□□□□□ -1.67
RPT3	YDR394W	HMRA2	P0CY13	119 aa		4.6	□□□□□ -1.67
RPT3	YDR394W	YKL070W	P36087	169 aa		4.6	□□□□□ -1.67
RPT3	YDR394W	MRPS8	Q03799	155 aa		4.6	□□□□□ -1.67
RPT3	YDR394W	YMR244W	Q04018	355 aa		4.6	□□□□□ -1.67
RPT3	YDR394W	YNL162W-A	Q3E7A8	72 aa		4.6	□□□□□ -1.67
RPT3	YDR394W	YOR008C-A	Q3E7B9	74 aa		4.6	□□□□□ -1.67
RPT3	YDR394W	YOL085C	Q99345	113 aa		4.6	□□□□□ -1.67
RPT3	YDR394W	RPL16B	P26785	198 aa	Known RBP	4.59	□□□□□ -1.67
RPT3	YDR394W	MIG3	P39943	394 aa		4.59	□□□□□ -1.67
RPT3	YDR394W	YPL073C	P40323	161 aa		4.59	□□□□□ -1.67
RPT3	YDR394W	YCH1	P42937	148 aa		4.59	□□□□□ -1.67
RPT3	YDR394W	AIM34	Q03673	198 aa		4.59	□□□□□ -1.67
RPT3	YDR394W	MBF1	O14467	151 aa	Known RBP	4.58	□□□□□ -1.68
RPT3	YDR394W	ADH2	P00331	348 aa	Known RBP	4.58	□□□□□ -1.68
RPT3	YDR394W	Q0255	P03881	472 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 75.1 ms