RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	RPL22A	P05749	121 aa	Known RBP	0.83	□□□□□ -2.28
NSE3	YDR288W	POP7	P38291	140 aa		0.83	□□□□□ -2.28
NSE3	YDR288W	SAE3	P89114	91 aa		0.83	□□□□□ -2.28
NSE3	YDR288W	DYN2	Q02647	92 aa		0.83	□□□□□ -2.28
NSE3	YDR288W	ENV10	Q99382	181 aa		0.83	□□□□□ -2.28
NSE3	YDR288W	GPI19	Q04082	140 aa		0.81	□□□□□ -2.28
NSE3	YDR288W	YGL041C-B	Q3E750	60 aa		0.81	□□□□□ -2.28
NSE3	YDR288W	SLO1	Q3E784	85 aa		0.81	□□□□□ -2.28
NSE3	YDR288W	YIL014C-A	Q02598	104 aa		0.8	□□□□□ -2.28
NSE3	YDR288W	LAA1	P39526	2014 aa		0.8	□□□□□ -2.28
NSE3	YDR288W	NUM1	Q00402	2748 aa		0.78	□□□□□ -2.28
NSE3	YDR288W	ACP1	P32463	125 aa		0.78	□□□□□ -2.28
NSE3	YDR288W	YOR376W-A	Q3E805	51 aa		0.78	□□□□□ -2.28
NSE3	YDR288W	SNF11	P38956	169 aa		0.77	□□□□□ -2.29
NSE3	YDR288W	LCL1	Q02786	101 aa		0.77	□□□□□ -2.29
NSE3	YDR288W	YRF1-3	P0CX14	1859 aa		0.77	□□□□□ -2.29
NSE3	YDR288W	YRF1-7	P0CX15	1859 aa		0.77	□□□□□ -2.29
NSE3	YDR288W	MYO2	P19524	1574 aa	Known RBP	0.76	□□□□□ -2.29
NSE3	YDR288W	MRP49	P32388	137 aa		0.76	□□□□□ -2.29
NSE3	YDR288W	ARL3	Q02804	198 aa		0.76	□□□□□ -2.29
NSE3	YDR288W	RAD50	P12753	1312 aa		0.75	□□□□□ -2.29
NSE3	YDR288W	YFR035C	P43608	114 aa		0.75	□□□□□ -2.29
NSE3	YDR288W	YPR117W	Q06116	2489 aa		0.75	□□□□□ -2.29
NSE3	YDR288W	RPS29B	P41058	56 aa	Known RBP	0.74	□□□□□ -2.29
NSE3	YDR288W	AIM11	P87275	137 aa		0.74	□□□□□ -2.29
NSE3	YDR288W	OST5	Q92316	86 aa		0.74	□□□□□ -2.29
NSE3	YDR288W	YPK9	Q12697	1472 aa		0.73	□□□□□ -2.29
NSE3	YDR288W	URA2	P07259	2214 aa	Known RBP	0.73	□□□□□ -2.29
NSE3	YDR288W	YPL261C	Q08976	102 aa		0.72	□□□□□ -2.29
NSE3	YDR288W	YLR118C	Q12354	227 aa		0.72	□□□□□ -2.29
NSE3	YDR288W	TY1B-H	O13535	1793 aa		0.71	□□□□□ -2.3
NSE3	YDR288W	AUA1	P32450	94 aa		0.71	□□□□□ -2.3
NSE3	YDR288W	VMA7	P39111	118 aa		0.71	□□□□□ -2.3
NSE3	YDR288W	FRQ1	Q06389	190 aa		0.71	□□□□□ -2.3
NSE3	YDR288W	WIP1	Q2V2P8	89 aa		0.71	□□□□□ -2.3
NSE3	YDR288W	TOR1	P35169	2470 aa		0.71	□□□□□ -2.3
NSE3	YDR288W	MYO1	P08964	1928 aa		0.7	□□□□□ -2.3
NSE3	YDR288W	PAU12	P53343	120 aa		0.7	□□□□□ -2.3
NSE3	YDR288W	YDR010C	Q12426	110 aa		0.7	□□□□□ -2.3
NSE3	YDR288W	YLR285C-A	Q3E771	56 aa		0.7	□□□□□ -2.3
NSE3	YDR288W	MON2	P48563	1636 aa	Predicted RBP	0.69	□□□□□ -2.3
NSE3	YDR288W	CYB5	P40312	120 aa		0.69	□□□□□ -2.3
NSE3	YDR288W	SPC24	Q04477	213 aa		0.69	□□□□□ -2.3
NSE3	YDR288W	COX23	P38824	151 aa		0.68	□□□□□ -2.3
NSE3	YDR288W	YEA6	P39953	335 aa		0.68	□□□□□ -2.3
NSE3	YDR288W	RPL22B	P56628	122 aa	Known RBP	0.68	□□□□□ -2.3
NSE3	YDR288W	APS2	Q00381	147 aa		0.68	□□□□□ -2.3
NSE3	YDR288W	YOR304C-A	O14468	76 aa		0.67	□□□□□ -2.3
NSE3	YDR288W	ADK1	P07170	222 aa	Known RBP	0.67	□□□□□ -2.3
NSE3	YDR288W	RUB1	Q03919	77 aa		0.67	□□□□□ -2.3
NSE3	YDR288W	YLR363W-A	Q3E747	85 aa		0.67	□□□□□ -2.3
NSE3	YDR288W	PCC1	Q3E833	88 aa		0.67	□□□□□ -2.3
NSE3	YDR288W	YCR099C	P25657	155 aa		0.66	□□□□□ -2.3
NSE3	YDR288W	RPB11	P38902	120 aa		0.66	□□□□□ -2.3
NSE3	YDR288W	TDA2	P40045	126 aa		0.66	□□□□□ -2.3
NSE3	YDR288W	YER187W	P40102	141 aa		0.66	□□□□□ -2.3
NSE3	YDR288W	YLR099W-A	Q3E798	87 aa		0.66	□□□□□ -2.3
NSE3	YDR288W	ECM5	Q03214	1411 aa		0.65	□□□□□ -2.3
NSE3	YDR288W	GCN1	P33892	2672 aa	Known RBP	0.65	□□□□□ -2.3
NSE3	YDR288W	YRF1-6	P53819	1859 aa		0.65	□□□□□ -2.3
NSE3	YDR288W	YHR130C	P38834	111 aa		0.65	□□□□□ -2.31
NSE3	YDR288W	RPO41	P13433	1351 aa	Known RBP	0.65	□□□□□ -2.31
NSE3	YDR288W	TEL1	P38110	2787 aa		0.65	□□□□□ -2.31
NSE3	YDR288W	URB1	P34241	1764 aa	Known RBP	0.65	□□□□□ -2.31
NSE3	YDR288W	FMP27	Q06179	2628 aa		0.64	□□□□□ -2.31
NSE3	YDR288W	LHP1	P33399	275 aa	Known RBP	0.64	□□□□□ -2.31
NSE3	YDR288W	YER137C	P40083	148 aa	Known RBP	0.64	□□□□□ -2.31
NSE3	YDR288W	YIR020C	P40575	100 aa		0.64	□□□□□ -2.31
NSE3	YDR288W	VPS55	P47111	140 aa		0.64	□□□□□ -2.31
NSE3	YDR288W	MRPS12	P53732	153 aa		0.64	□□□□□ -2.31
NSE3	YDR288W	YOR097C	Q12274	175 aa	Predicted RBP	0.64	□□□□□ -2.31
NSE3	YDR288W	RTR2	Q12378	196 aa		0.64	□□□□□ -2.31
NSE3	YDR288W	MLP1	Q02455	1875 aa	Known RBP	0.64	□□□□□ -2.31
NSE3	YDR288W	MDS3	P53094	1487 aa		0.63	□□□□□ -2.31
NSE3	YDR288W	YLR042C	Q07990	161 aa		0.63	□□□□□ -2.31
NSE3	YDR288W	ZEO1	Q08245	113 aa		0.63	□□□□□ -2.31
NSE3	YDR288W	FYV7	Q12247	151 aa		0.63	□□□□□ -2.31
NSE3	YDR288W	SPP41	P38904	1435 aa		0.63	□□□□□ -2.31
NSE3	YDR288W	SEC7	P11075	2009 aa	Known RBP	0.62	□□□□□ -2.31
NSE3	YDR288W	TOM1	Q03280	3268 aa		0.62	□□□□□ -2.31
NSE3	YDR288W	YAR029W	P39549	74 aa		0.62	□□□□□ -2.31
NSE3	YDR288W	RGI1	P40043	161 aa	Predicted RBP	0.62	□□□□□ -2.31
NSE3	YDR288W	PAM16	P42949	149 aa		0.62	□□□□□ -2.31
NSE3	YDR288W	SNN1	P48232	102 aa		0.62	□□□□□ -2.31
NSE3	YDR288W	YPL225W	Q08971	146 aa	Known RBP	0.62	□□□□□ -2.31
NSE3	YDR288W	DAD1	Q12248	94 aa		0.62	□□□□□ -2.31
NSE3	YDR288W	DNA2	P38859	1522 aa		0.61	□□□□□ -2.31
NSE3	YDR288W	SRB6	P32570	121 aa		0.61	□□□□□ -2.31
NSE3	YDR288W	RPS12	P48589	143 aa	Known RBP	0.61	□□□□□ -2.31
NSE3	YDR288W	YIR021W-A	Q3E739	70 aa		0.61	□□□□□ -2.31
NSE3	YDR288W	YBR072C-A	Q3E794	53 aa		0.61	□□□□□ -2.31
NSE3	YDR288W	BNI1	P41832	1953 aa		0.61	□□□□□ -2.31
NSE3	YDR288W	YRF1-1	P0CX20	1796 aa		0.6	□□□□□ -2.31
NSE3	YDR288W	YRF1-5	P0CX21	1796 aa		0.6	□□□□□ -2.31
NSE3	YDR288W	YRF1-8	P0CX22	1796 aa		0.6	□□□□□ -2.31
NSE3	YDR288W	UTP20	P35194	2493 aa	Known RBP	0.6	□□□□□ -2.31
NSE3	YDR288W	HMRA2	P0CY13	119 aa		0.6	□□□□□ -2.31
NSE3	YDR288W	VMA21	P41806	77 aa		0.6	□□□□□ -2.31
NSE3	YDR288W	SNF2	P22082	1703 aa		0.6	□□□□□ -2.31
NSE3	YDR288W	SEC16	P48415	2195 aa	Known RBP	0.6	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms