RNA–Protein interactions for RNA: YDR235W

PRP42, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP42, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP42YDR235W COX23P38824 151 aa-0.13□□□□□ -2.43
PRP42YDR235W HSP10P38910 106 aa-0.13□□□□□ -2.43
PRP42YDR235W GAT4P40569 121 aa-0.13□□□□□ -2.43
PRP42YDR235W LSM8P47093 109 aaKnown RBP-0.13□□□□□ -2.43
PRP42YDR235W MOG1P47123 218 aa-0.13□□□□□ -2.43
PRP42YDR235W MAK3Q03503 176 aa-0.13□□□□□ -2.43
PRP42YDR235W SDH7Q04401 133 aa-0.13□□□□□ -2.43
PRP42YDR235W MED11Q99278 115 aa-0.13□□□□□ -2.43
PRP42YDR235W RIM15P43565 1770 aa-0.14□□□□□ -2.43
PRP42YDR235W ADK1P07170 222 aaKnown RBP-0.14□□□□□ -2.43
PRP42YDR235W MRPL44P19956 98 aa-0.14□□□□□ -2.43
PRP42YDR235W VPS51P36116 164 aa-0.14□□□□□ -2.43
PRP42YDR235W RBL2P48606 106 aaKnown RBP-0.14□□□□□ -2.43
PRP42YDR235W ERV14P53173 138 aa-0.14□□□□□ -2.43
PRP42YDR235W GPI19Q04082 140 aa-0.14□□□□□ -2.43
PRP42YDR235W RAF1Q06891 181 aa-0.14□□□□□ -2.43
PRP42YDR235W SPC3Q12133 184 aa-0.14□□□□□ -2.43
PRP42YDR235W PCC1Q3E833 88 aa-0.14□□□□□ -2.43
PRP42YDR235W ECM5Q03214 1411 aa-0.15□□□□□ -2.43
PRP42YDR235W QCR6P00127 147 aa-0.15□□□□□ -2.43
PRP42YDR235W PFY1P07274 126 aa-0.15□□□□□ -2.43
PRP42YDR235W PBI2P0CT04 75 aaKnown RBP-0.15□□□□□ -2.43
PRP42YDR235W PET54P10834 293 aa-0.15□□□□□ -2.43
PRP42YDR235W SEC59P20048 519 aa-0.15□□□□□ -2.43
PRP42YDR235W CYC2P38909 366 aa-0.15□□□□□ -2.43
PRP42YDR235W SNF11P38956 169 aa-0.15□□□□□ -2.43
PRP42YDR235W PHS1P40857 217 aa-0.15□□□□□ -2.43
PRP42YDR235W TIM8P57744 87 aa-0.15□□□□□ -2.43
PRP42YDR235W YDR366CP87287 132 aa-0.15□□□□□ -2.43
PRP42YDR235W PKR1Q03880 122 aaKnown RBP-0.15□□□□□ -2.43
PRP42YDR235W YGL041C-BQ3E750 60 aa-0.15□□□□□ -2.43
PRP42YDR235W RAD50P12753 1312 aa-0.15□□□□□ -2.43
PRP42YDR235W RPO41P13433 1351 aaKnown RBP-0.15□□□□□ -2.43
PRP42YDR235W YRF1-2P40105 1681 aa-0.16□□□□□ -2.43
PRP42YDR235W RPL36BO14455 100 aaKnown RBP-0.16□□□□□ -2.43
PRP42YDR235W RPL36AP05745 100 aaPredicted RBP-0.16□□□□□ -2.43
PRP42YDR235W RPS28BP0C0X0 67 aaKnown RBP-0.16□□□□□ -2.43
PRP42YDR235W YFR009W-AP0C5M9 85 aa-0.16□□□□□ -2.43
PRP42YDR235W ACP1P32463 125 aa-0.16□□□□□ -2.43
PRP42YDR235W TDA2P40045 126 aa-0.16□□□□□ -2.43
PRP42YDR235W RPC10P40422 70 aa-0.16□□□□□ -2.43
PRP42YDR235W SFT1P43682 97 aa-0.16□□□□□ -2.43
PRP42YDR235W YGR039WP53225 103 aa-0.16□□□□□ -2.43
PRP42YDR235W RUB1Q03919 77 aa-0.16□□□□□ -2.43
PRP42YDR235W RAV2Q03956 351 aa-0.16□□□□□ -2.43
PRP42YDR235W SPC24Q04477 213 aa-0.16□□□□□ -2.43
PRP42YDR235W ATP14Q12349 124 aa-0.16□□□□□ -2.43
PRP42YDR235W OCA6Q12454 224 aa-0.16□□□□□ -2.43
PRP42YDR235W YIR021W-AQ3E739 70 aa-0.16□□□□□ -2.43
PRP42YDR235W RPS28AQ3E7X9 67 aaPredicted RBP-0.16□□□□□ -2.43
PRP42YDR235W TY1B-BLQ12490 1755 aa-0.16□□□□□ -2.43
PRP42YDR235W PAU19P0CE85 124 aa-0.16□□□□□ -2.44
PRP42YDR235W ROX3P25046 220 aa-0.16□□□□□ -2.44
PRP42YDR235W PAU3P25610 124 aa-0.16□□□□□ -2.44
PRP42YDR235W ARC19P33204 171 aaKnown RBP-0.16□□□□□ -2.44
PRP42YDR235W SHU1P38751 150 aa-0.16□□□□□ -2.44
PRP42YDR235W YAR029WP39549 74 aa-0.16□□□□□ -2.44
PRP42YDR235W YIR020CP40575 100 aa-0.16□□□□□ -2.44
PRP42YDR235W SPG1P50088 95 aa-0.16□□□□□ -2.44
PRP42YDR235W YGR042WP53227 271 aa-0.16□□□□□ -2.44
PRP42YDR235W SAE3P89114 91 aa-0.16□□□□□ -2.44
PRP42YDR235W YPL261CQ08976 102 aa-0.16□□□□□ -2.44
PRP42YDR235W YBR072C-AQ3E794 53 aa-0.16□□□□□ -2.44
PRP42YDR235W YIL134C-AQ45U18 67 aa-0.16□□□□□ -2.44
PRP42YDR235W TOP2P06786 1428 aaKnown RBP-0.17□□□□□ -2.44
PRP42YDR235W YRF1-1P0CX20 1796 aa-0.17□□□□□ -2.44
PRP42YDR235W YRF1-5P0CX21 1796 aa-0.17□□□□□ -2.44
PRP42YDR235W YRF1-8P0CX22 1796 aa-0.17□□□□□ -2.44
PRP42YDR235W YJL197C-AP0C5P0 93 aa-0.17□□□□□ -2.44
PRP42YDR235W RPS11AP0CX47 156 aaKnown RBP-0.17□□□□□ -2.44
PRP42YDR235W RPS11BP0CX48 156 aaKnown RBP-0.17□□□□□ -2.44
PRP42YDR235W BUD23P25627 275 aaPredicted RBP-0.17□□□□□ -2.44
PRP42YDR235W YER187WP40102 141 aa-0.17□□□□□ -2.44
PRP42YDR235W YIL086CP40503 102 aa-0.17□□□□□ -2.44
PRP42YDR235W PAU15P40585 124 aa-0.17□□□□□ -2.44
PRP42YDR235W IMP2P46972 177 aa-0.17□□□□□ -2.44
PRP42YDR235W ICS3P47034 131 aa-0.17□□□□□ -2.44
PRP42YDR235W SNN1P48232 102 aa-0.17□□□□□ -2.44
PRP42YDR235W SGF11Q03067 99 aa-0.17□□□□□ -2.44
PRP42YDR235W TLG1Q03322 224 aa-0.17□□□□□ -2.44
PRP42YDR235W YDR210WQ03482 75 aa-0.17□□□□□ -2.44
PRP42YDR235W CNL1Q06333 122 aa-0.17□□□□□ -2.44
PRP42YDR235W OST5Q92316 86 aa-0.17□□□□□ -2.44
PRP42YDR235W TY1B-LR3P0C2I6 1755 aaKnown RBP-0.17□□□□□ -2.44
PRP42YDR235W TY1B-PR3P0C2J1 1755 aaKnown RBP-0.17□□□□□ -2.44
PRP42YDR235W HKR1P41809 1802 aa-0.18□□□□□ -2.44
PRP42YDR235W CAT8P39113 1433 aa-0.18□□□□□ -2.44
PRP42YDR235W PAU6P0CE90 120 aa-0.18□□□□□ -2.44
PRP42YDR235W PAU18P0CE91 120 aa-0.18□□□□□ -2.44
PRP42YDR235W YJR107C-AP0CT86 78 aa-0.18□□□□□ -2.44
PRP42YDR235W PAU16P35994 123 aa-0.18□□□□□ -2.44
PRP42YDR235W YBR016WP38216 128 aa-0.18□□□□□ -2.44
PRP42YDR235W GIM4P40005 111 aaKnown RBP-0.18□□□□□ -2.44
PRP42YDR235W YNL198CP40166 100 aa-0.18□□□□□ -2.44
PRP42YDR235W LSM6Q06406 86 aaKnown RBP-0.18□□□□□ -2.44
PRP42YDR235W YLR099W-AQ3E798 87 aa-0.18□□□□□ -2.44
PRP42YDR235W MRP49P32388 137 aa-0.19□□□□□ -2.44
PRP42YDR235W RPS20P38701 121 aaKnown RBP-0.19□□□□□ -2.44
PRP42YDR235W MRX7P53869 86 aa-0.19□□□□□ -2.44
PRP42YDR235W RPL22BP56628 122 aaKnown RBP-0.19□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms