RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 TSPAN16Q9UKR8 245 aa17.83■□□□□ 0.45
PHGDH-229ENST00000641891 DRG1Q9Y295 367 aaKnown RBP17.83■□□□□ 0.45
PHGDH-229ENST00000641891 TRIP11Q15643 1979 aa17.83■□□□□ 0.44
PHGDH-229ENST00000641891 E5RJQ4 531 aa17.83■□□□□ 0.44
PHGDH-229ENST00000641891 GRAP2O75791 330 aa17.83■□□□□ 0.44
PHGDH-229ENST00000641891 KRT7P08729 469 aa17.83■□□□□ 0.44
PHGDH-229ENST00000641891 PECAM1P16284 738 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-229ENST00000641891 MAGEA4P43358 317 aa17.83■□□□□ 0.44
PHGDH-229ENST00000641891 GDF10P55107 478 aa17.83■□□□□ 0.44
PHGDH-229ENST00000641891 FASTKD3Q14CZ7 662 aaKnown RBP17.83■□□□□ 0.44
PHGDH-229ENST00000641891 FAM183BPQ6ZVS7 135 aa17.83■□□□□ 0.44
PHGDH-229ENST00000641891 ZNF410Q86VK4 478 aa17.83■□□□□ 0.44
PHGDH-229ENST00000641891 ARHGEF2Q92974 986 aaKnown RBP17.83■□□□□ 0.44
PHGDH-229ENST00000641891 OSMRQ99650 979 aa17.83■□□□□ 0.44
PHGDH-229ENST00000641891 PRMT1Q99873 361 aaKnown RBP17.83■□□□□ 0.44
PHGDH-229ENST00000641891 MRPL45Q9BRJ2 306 aaKnown RBP17.83■□□□□ 0.44
PHGDH-229ENST00000641891 SAYSD1Q9NPB0 183 aa17.83■□□□□ 0.44
PHGDH-229ENST00000641891 INTS9Q9NV88 658 aaKnown RBP17.83■□□□□ 0.44
PHGDH-229ENST00000641891 NME7Q9Y5B8 376 aa17.83■□□□□ 0.44
PHGDH-229ENST00000641891 DYNC1LI2O43237 492 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-229ENST00000641891 ITGAVP06756 1048 aa17.82■□□□□ 0.44
PHGDH-229ENST00000641891 IFNAR2P48551 515 aa17.82■□□□□ 0.44
PHGDH-229ENST00000641891 RGS7P49802 495 aa17.82■□□□□ 0.44
PHGDH-229ENST00000641891 GOLGA7BQ2TAP0 167 aa17.82■□□□□ 0.44
PHGDH-229ENST00000641891 GLRA4Q5JXX5 417 aa17.82■□□□□ 0.44
PHGDH-229ENST00000641891 C18orf25Q96B23 403 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-229ENST00000641891 CHMP6Q96FZ7 201 aa17.82■□□□□ 0.44
PHGDH-229ENST00000641891 RASSF4Q9H2L5 321 aa17.82■□□□□ 0.44
PHGDH-229ENST00000641891 TBK1Q9UHD2 729 aa17.82■□□□□ 0.44
PHGDH-229ENST00000641891 TPX2Q9ULW0 747 aaKnown RBP17.82■□□□□ 0.44
PHGDH-229ENST00000641891 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.82■□□□□ 0.44
PHGDH-229ENST00000641891 KAT6AQ92794 2004 aa17.82■□□□□ 0.44
PHGDH-229ENST00000641891 C5orf60A6NFR6 353 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 GPR32O75388 356 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 MAGEA9P43362 315 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 LIG3P49916 1009 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 SF3A3Q12874 501 aaKnown RBP eCLIP17.81■□□□□ 0.441e-9■■■■□ 22.2
PHGDH-229ENST00000641891 MYO1EQ12965 1108 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 IFT88Q13099 833 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 HIC1Q14526 733 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 C15orf59Q2T9L4 293 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-229ENST00000641891 SMYD5Q6GMV2 418 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 OR6B2Q6IFH4 312 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 CATSPER4Q7RTX7 472 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 KCTD6Q8NC69 237 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 CCHCR1Q8TD31 782 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 MGARPQ8TDB4 240 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 ZNF317Q96PQ6 595 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-229ENST00000641891 LPIN3Q9BQK8 851 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 NT5C1AQ9BXI3 368 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 GBA2Q9HCG7 927 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-229ENST00000641891 GJD2Q9UKL4 321 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 USP18Q9UMW8 372 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 SCN1AP35498 2009 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 TRUB2O95900 331 aaKnown RBP17.81■□□□□ 0.44
PHGDH-229ENST00000641891 SMIM10L2AP0DMW4 78 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 SMIM10L2BP0DMW5 78 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 GAD2Q05329 585 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 MMRN1Q13201 1228 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 LRRC14Q15048 493 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 TAZQ16635 292 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 PPP1R26Q5T8A7 1209 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-229ENST00000641891 RNASEH2BQ5TBB1 312 aaKnown RBP17.81■□□□□ 0.44
PHGDH-229ENST00000641891 IQSEC1Q6DN90 963 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 LCLAT1Q6UWP7 414 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 TAOK1Q7L7X3 1001 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 CPLX4Q7Z7G2 160 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 ACOT1Q86TX2 421 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 RFX6Q8HWS3 928 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 RELL1Q8IUW5 271 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 TAB3Q8N5C8 712 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-229ENST00000641891 SEC16BQ96JE7 1060 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 SNX27Q96L92 541 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 PARK7Q99497 189 aaKnown RBP17.81■□□□□ 0.44
PHGDH-229ENST00000641891 FAM49BQ9NUQ9 324 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 SNX9Q9Y5X1 595 aa17.81■□□□□ 0.44
PHGDH-229ENST00000641891 GOLGA8MH3BSY2 632 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 HCRTO43612 131 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 BANF1O75531 89 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 STAU1O95793 577 aaKnown RBP17.8■□□□□ 0.44
PHGDH-229ENST00000641891 CDO1Q16878 200 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 FAM110CQ1W6H9 321 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 DCAF4L1Q3SXM0 396 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 FAM182AQ5T1J6 154 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 SPRYD7Q5W111 196 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 VSTM1Q6UX27 236 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 CAPN12Q6ZSI9 719 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 BBS12Q6ZW61 710 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 APOL6Q9BWW8 343 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 NXF3Q9H4D5 531 aaKnown RBP17.8■□□□□ 0.44
PHGDH-229ENST00000641891 PCDH9Q9HC56 1237 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 CPA4Q9UI42 421 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 RNF8O76064 485 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 GPR162Q16538 588 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 C6orf89Q6UWU4 347 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 MICALCLQ6ZW33 695 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 CYP4V2Q6ZWL3 525 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-229ENST00000641891 SPATS2Q86XZ4 545 aaKnown RBP17.8■□□□□ 0.44
PHGDH-229ENST00000641891 RXFP2Q8WXD0 754 aa17.8■□□□□ 0.44
PHGDH-229ENST00000641891 KAT2BQ92831 832 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms