RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 NT5DC3Q86UY8 548 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 TMEM86AQ8N2M4 240 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 C12orf29Q8N999 325 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 MNS1Q8NEH6 495 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 UBA3Q8TBC4 463 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 OSBPL9Q96SU4 736 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 LPIN3Q9BQK8 851 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 FAM49BQ9NUQ9 324 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 TBC1D13Q9NVG8 400 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 KANSL3Q9P2N6 904 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 CYTH4Q9UIA0 394 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 TSPAN16Q9UKR8 245 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 AMFRQ9UKV5 643 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 LRFN2Q9ULH4 789 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 PACSIN2Q9UNF0 486 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-221ENST00000641573 SCN5AQ14524 2016 aa13.86□□□□□ -0.19
PHGDH-221ENST00000641573 UQCRHLA0A096LP55 91 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-221ENST00000641573 GABRDO14764 452 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 B3GAT3O94766 335 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 DDHD2O94830 711 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 KIF4AO95239 1232 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 UQCRHP07919 91 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 GPD2P43304 727 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 BRCC3P46736 316 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 DSC1Q08554 894 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 MAMLD1Q13495 774 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 MESDQ14696 234 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 PTPROQ16827 1216 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 PTPN20Q4JDL3 420 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 PPP1R26Q5T8A7 1209 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-221ENST00000641573 PLEKHA7Q6IQ23 1121 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 PTCRAQ6ISU1 281 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-221ENST00000641573 ZNF280BQ86YH2 543 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 MSANTD4Q8NCY6 345 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 TNIP3Q96KP6 325 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 MRPL47Q9HD33 250 aaKnown RBP13.85□□□□□ -0.19
PHGDH-221ENST00000641573 PARVAQ9NVD7 372 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 MTUS1Q9ULD2 1270 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 ALG6Q9Y672 507 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 SCINQ9Y6U3 715 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 BRWD1Q9NSI6 2320 aa13.85□□□□□ -0.19
PHGDH-221ENST00000641573 I3L4J1 428 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 ZNF185O15231 689 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 HOXA2O43364 376 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 B4GALT3O60512 393 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 ODC1P11926 461 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 IL9P15248 144 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 LHX1P48742 406 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 DNA2P51530 1060 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 RNASELQ05823 741 aaKnown RBP13.84□□□□□ -0.19
PHGDH-221ENST00000641573 PDCLQ13371 301 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 PUS10Q3MIT2 529 aaKnown RBP13.84□□□□□ -0.19
PHGDH-221ENST00000641573 PAN2Q504Q3 1202 aaKnown RBP13.84□□□□□ -0.19
PHGDH-221ENST00000641573 CYP4A22Q5TCH4 519 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 DNAJC24Q6P3W2 148 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 CNKSR3Q6P9H4 555 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 COLGALT2Q8IYK4 626 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 ABI1Q8IZP0 508 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 CEP112Q8N8E3 955 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 LRRN4CLQ8ND94 238 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 COG1Q8WTW3 980 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 C18orf8Q96DM3 657 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 BTBD6Q96KE9 485 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 CAPZA3Q96KX2 299 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 CASD1Q96PB1 797 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 FAM193BQ96PV7 902 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-221ENST00000641573 PSMB7Q99436 277 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 DDX43Q9NXZ2 648 aaKnown RBP13.84□□□□□ -0.19
PHGDH-221ENST00000641573 HESX1Q9UBX0 185 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 ANAPC7Q9UJX3 599 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 STRIP2Q9ULQ0 834 aa13.84□□□□□ -0.19
PHGDH-221ENST00000641573 TIMM13Q9Y5L4 95 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-221ENST00000641573 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-221ENST00000641573 TCRBV5S1A1TA0A578 114 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 M0QZQ0 153 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 SETSIPP0DME0 302 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 CCDC130P13994 396 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 PTPN1P18031 435 aaKnown RBP13.83□□□□□ -0.2
PHGDH-221ENST00000641573 COMTP21964 271 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 ACAT1P24752 427 aaKnown RBP13.83□□□□□ -0.2
PHGDH-221ENST00000641573 ADORA2BP29275 332 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 CXCR5P32302 372 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 GTF2F1P35269 517 aaKnown RBP eCLIP13.83□□□□□ -0.2
PHGDH-221ENST00000641573 GATMP50440 423 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 PSMC1P62191 440 aaKnown RBP13.83□□□□□ -0.2
PHGDH-221ENST00000641573 CKAP4Q07065 602 aaKnown RBP13.83□□□□□ -0.2
PHGDH-221ENST00000641573 PKDCCQ504Y2 493 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 SPRED2Q7Z698 418 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 TTC30AQ86WT1 665 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 METTL23Q86XA0 190 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 NPAS4Q8IUM7 802 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 B3GALNT2Q8NCR0 500 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-221ENST00000641573 FEZF2Q8TBJ5 459 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 SPATA18Q8TC71 538 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 HASPINQ8TF76 798 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 RSPH1Q8WYR4 309 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 HES6Q96HZ4 224 aa13.83□□□□□ -0.2
PHGDH-221ENST00000641573 TGS1Q96RS0 853 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms