RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 KLHL5Q96PQ7 755 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 HNRNPABQ99729 332 aaKnown RBP13.71□□□□□ -0.21
PHGDH-218ENST00000641491 ZNF518BQ9C0D4 1074 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 NSUN3Q9H649 340 aaKnown RBP13.71□□□□□ -0.21
PHGDH-218ENST00000641491 NHEJ1Q9H9Q4 299 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-218ENST00000641491 LRRC4Q9HBW1 653 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 RXFP1Q9HBX9 757 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 CRTAC1Q9NQ79 661 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.71□□□□□ -0.21
PHGDH-218ENST00000641491 ARIH1Q9Y4X5 557 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-218ENST00000641491 IRAK3Q9Y616 596 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 PTPRSQ13332 1948 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 SSU72P8A0A1W2PR75 194 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 MTMR11A4FU01 709 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 O00370 1275 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 FSCN2O14926 492 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 MMEP08473 750 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 CNPP09543 421 aaKnown RBP13.7□□□□□ -0.22
PHGDH-218ENST00000641491 HNRNPH3P31942 346 aaKnown RBP13.7□□□□□ -0.22
PHGDH-218ENST00000641491 EIF4A3P38919 411 aaKnown RBP13.7□□□□□ -0.22
PHGDH-218ENST00000641491 ACADSBP45954 432 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 EPHB3P54753 998 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 MAP3K7CLP57077 242 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 RAB33AQ14088 237 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 CFAP221Q4G0U5 840 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 PPM1LQ5SGD2 360 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 DPY19L2P1Q6NXN4 242 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 FAM171BQ6P995 826 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 EP400NLQ6ZTU2 488 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 RBM23Q86U06 439 aaKnown RBP13.7□□□□□ -0.22
PHGDH-218ENST00000641491 NOP9Q86U38 636 aaKnown RBP13.7□□□□□ -0.22
PHGDH-218ENST00000641491 ITIH5Q86UX2 942 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 ZNF461Q8TAF7 563 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 GCNAQ96QF7 691 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 TMEM209Q96SK2 561 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 UHRF1Q96T88 793 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-218ENST00000641491 RTP3Q9BQQ7 232 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 CLSTN3Q9BQT9 956 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 DUSP16Q9BY84 665 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 PRDM12Q9H4Q4 367 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 IGFLR1Q9H665 355 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 THEGQ9P2T0 379 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 PCDHGC3Q9UN70 934 aa13.7□□□□□ -0.22
PHGDH-218ENST00000641491 SCN1AP35498 2009 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 WDR27A2RRH5 827 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 ANKRD62A6NC57 917 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 HIDE1A8MVS5 230 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 TMCO5BA8MYB1 307 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 RNF225M0QZC1 329 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-218ENST00000641491 CLDN5O00501 218 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 XPO1O14980 1071 aaKnown RBP13.69□□□□□ -0.22
PHGDH-218ENST00000641491 XYLBO75191 536 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 CALB1P05937 261 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 ATF2P15336 505 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 SSTR3P32745 418 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-218ENST00000641491 MAGEA11P43364 429 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 NRIP1P48552 1158 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 KIF11P52732 1056 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 KRT83P78385 493 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 CDK17Q00537 523 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 IFRD2Q12894 506 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-218ENST00000641491 DUSP4Q13115 394 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 CCDC122Q5T0U0 273 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 LLGL2Q6P1M3 1020 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 RNF19BQ6ZMZ0 732 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 IRF2BP2Q7Z5L9 587 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 SPRED2Q7Z698 418 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 KIAA1328Q86T90 577 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 ERICH1Q86X53 443 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 C1orf131Q8NDD1 294 aaKnown RBP13.69□□□□□ -0.22
PHGDH-218ENST00000641491 UBA3Q8TBC4 463 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 SLC20A1Q8WUM9 679 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 PPM1EQ8WY54 764 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 CASP10Q92851 521 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 SECISBP2LQ93073 1101 aaKnown RBP13.69□□□□□ -0.22
PHGDH-218ENST00000641491 C1QTNF1Q9BXJ1 281 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 B3GNT5Q9BYG0 378 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 PLEKHA4Q9H4M7 779 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 DZANK1Q9NVP4 752 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 LMCD1Q9NZU5 365 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 HSFX1Q9UBD0 423 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 STRIP2Q9ULQ0 834 aa13.69□□□□□ -0.22
PHGDH-218ENST00000641491 ARHGAP6O43182 974 aa13.68□□□□□ -0.22
PHGDH-218ENST00000641491 SART1O43290 800 aaKnown RBP13.68□□□□□ -0.22
PHGDH-218ENST00000641491 TGM5O43548 720 aa13.68□□□□□ -0.22
PHGDH-218ENST00000641491 NCK2O43639 380 aa13.68□□□□□ -0.22
PHGDH-218ENST00000641491 EFEMP2O95967 443 aa13.68□□□□□ -0.22
PHGDH-218ENST00000641491 C8AP07357 584 aa13.68□□□□□ -0.22
PHGDH-218ENST00000641491 CYP2F1P24903 491 aa13.68□□□□□ -0.22
PHGDH-218ENST00000641491 DNAJB1P25685 340 aa13.68□□□□□ -0.22
PHGDH-218ENST00000641491 IRS1P35568 1242 aa13.68□□□□□ -0.22
PHGDH-218ENST00000641491 CDR1P51861 262 aa13.68□□□□□ -0.22
PHGDH-218ENST00000641491 C10orf76Q5T2E6 689 aa13.68□□□□□ -0.22
PHGDH-218ENST00000641491 NAA35Q5VZE5 725 aa13.68□□□□□ -0.22
PHGDH-218ENST00000641491 RTL10Q7L3V2 364 aa13.68□□□□□ -0.22
PHGDH-218ENST00000641491 ZNF571Q7Z3V5 609 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-218ENST00000641491 LRRC8AQ8IWT6 810 aa13.68□□□□□ -0.22
PHGDH-218ENST00000641491 FUKQ8N0W3 1084 aa13.68□□□□□ -0.22
PHGDH-218ENST00000641491 ATAD1Q8NBU5 361 aa13.68□□□□□ -0.22
PHGDH-218ENST00000641491 KREMEN2Q8NCW0 462 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms