RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 SP4Q02446 784 aa12.4□□□□□ -0.42
RBFOX1-224ENST00000641259 CNGA3Q16281 694 aa12.4□□□□□ -0.42
RBFOX1-224ENST00000641259 Q3C1V9 767 aa12.4□□□□□ -0.42
RBFOX1-224ENST00000641259 C2CD6Q53TS8 623 aa12.4□□□□□ -0.42
RBFOX1-224ENST00000641259 MAP1SQ66K74 1059 aaPredicted RBP12.4□□□□□ -0.42
RBFOX1-224ENST00000641259 ERO1BQ86YB8 467 aa12.4□□□□□ -0.42
RBFOX1-224ENST00000641259 KBTBD2Q8IY47 623 aa12.4□□□□□ -0.42
RBFOX1-224ENST00000641259 RNASEH1O60930 286 aaKnown RBP12.4□□□□□ -0.43
RBFOX1-224ENST00000641259 ZNF24P17028 368 aa12.4□□□□□ -0.43
RBFOX1-224ENST00000641259 RPA3P35244 121 aaPredicted RBP12.4□□□□□ -0.43
RBFOX1-224ENST00000641259 NCOA4Q13772 614 aa12.4□□□□□ -0.43
RBFOX1-224ENST00000641259 PAOXQ6QHF9 649 aa12.4□□□□□ -0.43
RBFOX1-224ENST00000641259 ZC3H3Q8IXZ2 948 aaKnown RBP12.4□□□□□ -0.43
RBFOX1-224ENST00000641259 NSUN6Q8TEA1 469 aaKnown RBP12.4□□□□□ -0.43
RBFOX1-224ENST00000641259 ANKRD27Q96NW4 1050 aa12.4□□□□□ -0.43
RBFOX1-224ENST00000641259 ECSITQ9BQ95 431 aa12.4□□□□□ -0.43
RBFOX1-224ENST00000641259 MYPNQ86TC9 1320 aa12.4□□□□□ -0.43
RBFOX1-224ENST00000641259 PODXLO00592 558 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 TGFB1I1O43294 461 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 KDM1AO60341 852 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 P4HBP07237 508 aaKnown RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 RARGP13631 454 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 KRT4P19013 534 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 HOXA7P31268 230 aaPredicted RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 ARL1P40616 181 aaPredicted RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 RARRES1P49788 294 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 CDK7P50613 346 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 SH3BGRP55822 239 aaPredicted RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 PRAMEP78395 509 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 PKN2Q16513 984 aaKnown RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 KNOP1Q1ED39 458 aaKnown RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 TCHHL1Q5QJ38 904 aaPredicted RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 GPAT2Q6NUI2 795 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 TMEM214Q6NUQ4 689 aaKnown RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 VSTM1Q6UX27 236 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 APLFQ8IW19 511 aaPredicted RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 MYCT1Q8N699 235 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 SAMD3Q8N6K7 520 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 RFWD2Q8NHY2 731 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 ELMO3Q96BJ8 720 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 GRAMD1AQ96CP6 724 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 GPRC5CQ9NQ84 441 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 CYLDQ9NQC7 956 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 CDH16O75309 829 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 TBCAO75347 108 aaKnown RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 CYP1A1P04798 512 aaPredicted RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 CASP4P49662 377 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 NPEPPSP55786 919 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 PTENP60484 403 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 DAB2IPQ5VWQ8 1189 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 PATL1Q86TB9 770 aaKnown RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 NT5DC3Q86UY8 548 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 ATL2Q8NHH9 583 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 ZC3H15Q8WU90 426 aaKnown RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 ALG3Q92685 438 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 PALMDQ9NP74 551 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 FAM187AA6NFU0 413 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 CASQ2O14958 399 aaPredicted RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 ZNF862O60290 1169 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 ZWINTO95229 277 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 ADRA1DP25100 572 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 YWHABP31946 246 aaKnown RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 SSTR3P32745 418 aaPredicted RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 HPCAP84074 193 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 CARTPTQ16568 116 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 WDR72Q3MJ13 1102 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 TMEM53Q6P2H8 277 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 PADI6Q6TGC4 694 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 RIPOR1Q6ZS17 1223 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 ZNF662Q6ZS27 426 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 LOXHD1Q8IVV2 1947 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 AGR3Q8TD06 166 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 PPP1R36Q96LQ0 422 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 RBM15Q96T37 977 aaKnown RBP eCLIP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 TRIM56Q9BRZ2 755 aaKnown RBP12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 TIPINQ9BVW5 301 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 SPATC1LQ9H0A9 340 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 ZNF408Q9H9D4 720 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 OLFML3Q9NRN5 406 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 TBC1D22BQ9NU19 505 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 KCNH4Q9UQ05 1017 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 HEY1Q9Y5J3 304 aa12.39□□□□□ -0.43
RBFOX1-224ENST00000641259 ARID2Q68CP9 1835 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 I3L4J1 428 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 NOP56O00567 594 aaKnown RBP12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 GJB6O95452 261 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 ASMTLO95671 621 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 MYL2P10916 166 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 ANPEPP15144 967 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 NCF2P19878 526 aaPredicted RBP12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 MSX2P35548 267 aaPredicted RBP12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 QARSP47897 775 aaKnown RBP12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 ZNF200P98182 395 aaPredicted RBP12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 AP1B1Q10567 949 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 MKRN3Q13064 507 aaKnown RBP12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 ITGA7Q13683 1181 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 GALNTL6Q49A17 601 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 ITPRIPL1Q6GPH6 555 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 B3GNT6Q6ZMB0 384 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms