RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 SNX16P57768 344 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 PSMD5Q16401 504 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 PRSS55Q6UWB4 352 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-210ENST00000641115 PAQR9Q6ZVX9 377 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 LRRTM3Q86VH5 581 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 RHOT2Q8IXI1 618 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 SLC35F5Q8WV83 523 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 CPXM1Q96SM3 734 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 GDF15Q99988 308 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 TMLHEQ9NVH6 421 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 MYO1AQ9UBC5 1043 aa20.96■□□□□ 0.95
PHGDH-210ENST00000641115 LINC01553A4QN01 128 aa20.95■□□□□ 0.94
PHGDH-210ENST00000641115 ATMINO43313 823 aaPredicted RBP20.95■□□□□ 0.94
PHGDH-210ENST00000641115 DSG1Q02413 1049 aa20.95■□□□□ 0.94
PHGDH-210ENST00000641115 PTPN20Q4JDL3 420 aa20.95■□□□□ 0.94
PHGDH-210ENST00000641115 VPS52Q8N1B4 723 aa20.95■□□□□ 0.94
PHGDH-210ENST00000641115 RNF10Q8N5U6 811 aaKnown RBP20.95■□□□□ 0.94
PHGDH-210ENST00000641115 KLHL23Q8NBE8 558 aa20.95■□□□□ 0.94
PHGDH-210ENST00000641115 STK32AQ8WU08 396 aa20.95■□□□□ 0.94
PHGDH-210ENST00000641115 ARHGEF26Q96DR7 871 aa20.95■□□□□ 0.94
PHGDH-210ENST00000641115 MTRRQ9UBK8 725 aa20.95■□□□□ 0.94
PHGDH-210ENST00000641115 C2CD2LO14523 706 aa20.94■□□□□ 0.94
PHGDH-210ENST00000641115 XPO1O14980 1071 aaKnown RBP20.94■□□□□ 0.94
PHGDH-210ENST00000641115 AP1G2O75843 785 aa20.94■□□□□ 0.94
PHGDH-210ENST00000641115 RRM1P23921 792 aa20.94■□□□□ 0.94
PHGDH-210ENST00000641115 BMPR1AP36894 532 aa20.94■□□□□ 0.94
PHGDH-210ENST00000641115 NOP2P46087 812 aaKnown RBP20.94■□□□□ 0.94
PHGDH-210ENST00000641115 CDR1P51861 262 aa20.94■□□□□ 0.94
PHGDH-210ENST00000641115 PTP4A2Q12974 167 aa20.94■□□□□ 0.94
PHGDH-210ENST00000641115 IFI16Q16666 785 aaKnown RBP20.94■□□□□ 0.94
PHGDH-210ENST00000641115 C2CD6Q53TS8 623 aa20.94■□□□□ 0.94
PHGDH-210ENST00000641115 CLEC20AQ6ZU45 233 aa20.94■□□□□ 0.94
PHGDH-210ENST00000641115 NYAP1Q6ZVC0 841 aa20.94■□□□□ 0.94
PHGDH-210ENST00000641115 C18orf8Q96DM3 657 aa20.94■□□□□ 0.94
PHGDH-210ENST00000641115 AVENQ9NQS1 362 aaPredicted RBP20.94■□□□□ 0.94
PHGDH-210ENST00000641115 CTTNBP2NLQ9P2B4 639 aa20.94■□□□□ 0.94
PHGDH-210ENST00000641115 PAXBP1Q9Y5B6 917 aa20.94■□□□□ 0.94
PHGDH-210ENST00000641115 BACE2Q9Y5Z0 518 aa20.94■□□□□ 0.94
PHGDH-210ENST00000641115 GRXCR1A8MXD5 290 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 H0YGN5 161 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 TULP2O00295 520 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 TBC1D4O60343 1298 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 CYP1A2P05177 515 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 PLA2G4AP47712 749 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 RGS7P49802 495 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 ARPP19P56211 112 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 SMARCB1Q12824 385 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 FAM109BQ6ICB4 259 aaPredicted RBP20.93■□□□□ 0.94
PHGDH-210ENST00000641115 PMF1Q6P1K2 205 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 FBXO22Q8NEZ5 403 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 SLC35G2Q8TBE7 412 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 FUBP3Q96I24 572 aaKnown RBP eCLIP20.93■□□□□ 0.94
PHGDH-210ENST00000641115 PLVAPQ9BX97 442 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 CYLDQ9NQC7 956 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 WDR35Q9P2L0 1181 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 UVRAGQ9P2Y5 699 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 SALL4Q9UJQ4 1053 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 PCDHA11Q9Y5I1 949 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 CDY1Q9Y6F8 540 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 SCINQ9Y6U3 715 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 KIF2AO00139 706 aaPredicted RBP20.93■□□□□ 0.94
PHGDH-210ENST00000641115 BUB1O43683 1085 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 BDNFP23560 247 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 MAP3K7CLP57077 242 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 CFAP221Q4G0U5 840 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 CYP4A22Q5TCH4 519 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 SLC8B1Q6J4K2 584 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 CALR3Q96L12 384 aaKnown RBP20.93■□□□□ 0.94
PHGDH-210ENST00000641115 HSFY1Q96LI6 401 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 ALS2CR12Q96Q35 445 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 NUP85Q9BW27 656 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 IRX2Q9BZI1 471 aaPredicted RBP20.93■□□□□ 0.94
PHGDH-210ENST00000641115 MRPL47Q9HD33 250 aaKnown RBP20.93■□□□□ 0.94
PHGDH-210ENST00000641115 MRPL17Q9NRX2 175 aaKnown RBP20.93■□□□□ 0.94
PHGDH-210ENST00000641115 ABI2Q9NYB9 513 aaPredicted RBP20.93■□□□□ 0.94
PHGDH-210ENST00000641115 SSX2IPQ9Y2D8 614 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 PCDHB5Q9Y5E4 795 aa20.93■□□□□ 0.94
PHGDH-210ENST00000641115 PATJQ8NI35 1801 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 E5RJQ4 531 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 MOCS3O95396 460 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 ERBB2P04626 1255 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 CA3P07451 260 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 MYOGP15173 224 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 ACADSBP45954 432 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 GABRB2P47870 512 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 GNG11P61952 73 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 GPR17Q13304 367 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 PIGZQ86VD9 579 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 GPR65Q8IYL9 337 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 PGLYRP2Q96PD5 576 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 SLC4A5Q9BY07 1137 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 RHOBTB2Q9BYZ6 727 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 CSNK1G1Q9HCP0 422 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 OSGEPQ9NPF4 335 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 DMAP1Q9NPF5 467 aaPredicted RBP20.92■□□□□ 0.94
PHGDH-210ENST00000641115 PARVAQ9NVD7 372 aa20.92■□□□□ 0.94
PHGDH-210ENST00000641115 BEST1O76090 585 aa20.91■□□□□ 0.94
PHGDH-210ENST00000641115 TUBB4AP04350 444 aa20.91■□□□□ 0.94
PHGDH-210ENST00000641115 DNAJB2P25686 324 aa20.91■□□□□ 0.94
PHGDH-210ENST00000641115 GSCP56915 257 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms