RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ASB7Q9H672 318 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 LIN7BQ9HAP6 207 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 PLEKHA5Q9HAU0 1116 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 GCNT4Q9P109 453 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 IMPACTQ9P2X3 320 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 COQ4Q9Y3A0 265 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 PDCD11Q14690 1871 aaKnown RBP8.53□□□□□ -1.04
SCARB2-220ENST00000640076 TRIM43BA6NCK2 446 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 KIAA0355O15063 1070 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 C4BPAP04003 597 aaKnown RBP8.53□□□□□ -1.04
SCARB2-220ENST00000640076 GYPCP04921 128 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 NFICP08651 508 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 SLC9A1P19634 815 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 PON1P27169 355 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 PBX2P40425 430 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 AP3M2P53677 418 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 YARSP54577 528 aaKnown RBP8.53□□□□□ -1.04
SCARB2-220ENST00000640076 TFAMQ00059 246 aaKnown RBP8.53□□□□□ -1.04
SCARB2-220ENST00000640076 DUOXA2Q1HG44 320 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 MINDY4Q4G0A6 757 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 EPC2Q52LR7 807 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 TDRD10Q5VZ19 366 aaKnown RBP8.53□□□□□ -1.04
SCARB2-220ENST00000640076 JADE1Q6IE81 842 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 ALKAL1Q6UXT8 129 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 MRPL10Q7Z7H8 261 aaKnown RBP8.53□□□□□ -1.04
SCARB2-220ENST00000640076 RTN4RL1Q86UN2 441 aaPredicted RBP8.53□□□□□ -1.04
SCARB2-220ENST00000640076 CD302Q8IX05 232 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 HACE1Q8IYU2 909 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 VPS37AQ8NEZ2 397 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 DBF4BQ8NFT6 615 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 LMO3Q8TAP4 145 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 TAS1R2Q8TE23 839 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 ATXN2LQ8WWM7 1075 aaKnown RBP8.53□□□□□ -1.04
SCARB2-220ENST00000640076 LINC01599Q8WXQ3 324 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 TRIM43Q96BQ3 446 aaPredicted RBP8.53□□□□□ -1.04
SCARB2-220ENST00000640076 FTHL17Q9BXU8 183 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 TTYH3Q9C0H2 523 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 CXCL16Q9H2A7 254 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 RGS18Q9NS28 235 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 FAM207AQ9NSI2 230 aaPredicted RBP8.53□□□□□ -1.04
SCARB2-220ENST00000640076 SALL4Q9UJQ4 1053 aa8.53□□□□□ -1.04
SCARB2-220ENST00000640076 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.53□□□□□ -1.04
SCARB2-220ENST00000640076 MEIS3P2A8K0S8 358 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 C9IYK1 514 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 KHNYNO15037 678 aaKnown RBP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 EPHB6O15197 1021 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 RRP9O43818 475 aaKnown RBP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 FBXO21O94952 628 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 ATF7P17544 494 aaPredicted RBP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 TRIM21P19474 475 aaKnown RBP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 POU3F2P20265 443 aaPredicted RBP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 APBA1Q02410 837 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 CETN1Q12798 172 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 TMEM132DQ14C87 1099 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 CCDC92Q53HC0 331 aaPredicted RBP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 XKR4Q5GH76 650 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 FIGNQ5HY92 759 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 DPY19L2P1Q6NXN4 242 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 TRIM65Q6PJ69 517 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 SLC24A5Q71RS6 500 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 ZNF354CQ86Y25 554 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 FBXL13Q8NEE6 735 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 NEK11Q8NG66 645 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 SEPT8Q92599 483 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 SEMA4DQ92854 862 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 ZMAT2Q96NC0 199 aaKnown RBP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 TM9SF2Q99805 663 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 NUP58Q9BVL2 599 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 LSM14BQ9BX40 385 aaKnown RBP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 MTMR12Q9C0I1 747 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 INTS2Q9H0H0 1204 aaKnown RBP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 SIX2Q9NPC8 291 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 PRDM5Q9NQX1 630 aaPredicted RBP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 C2CD2Q9Y426 696 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 TTC3P53804 2025 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 GOLGA6L6A8MZA4 724 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 RNF225M0QZC1 329 aaPredicted RBP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 SUSD5O60279 629 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 LRRN2O75325 713 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 NOL4O94818 638 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 VNN1O95497 513 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 TIMP1P01033 207 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 TNNC2P02585 160 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 TMEM191BP0C7N4 346 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 ACTN1P12814 892 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 ITGA4P13612 1032 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 TYRP1P17643 537 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 ITGB8P26012 769 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 RFC2P35250 354 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 FXR1P51114 621 aaKnown RBP eCLIP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 GEMIN4P57678 1058 aaKnown RBP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 FAM189BP81408 668 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 BIRC3Q13489 604 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 TRIM14Q14142 442 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 GBX1Q14549 363 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 KRT72Q14CN4 511 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 TCTN1Q2MV58 587 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 FAM209AQ5JX71 171 aa8.52□□□□□ -1.05
SCARB2-220ENST00000640076 COL13A1Q5TAT6 717 aaPredicted RBP8.52□□□□□ -1.05
SCARB2-220ENST00000640076 PKN3Q6P5Z2 889 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms