RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 SPTLC2O15270 562 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 GRM6O15303 877 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 SOAT2O75908 522 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 RAPGEF3O95398 923 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 PAK4O96013 591 aaPredicted RBP1.34□□□□□ -2.19
LMBR1-222ENST00000638959 AMY1AP04745 511 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 SBK3P0C264 359 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 MTHFD1P11586 935 aaKnown RBP1.34□□□□□ -2.19
LMBR1-222ENST00000638959 CHRM3P20309 590 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 ZNF10P21506 573 aaPredicted RBP1.34□□□□□ -2.19
LMBR1-222ENST00000638959 FPR3P25089 353 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 CPA2P48052 419 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 SLC6A9P48067 706 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 ALDH7A1P49419 539 aaKnown RBP1.34□□□□□ -2.19
LMBR1-222ENST00000638959 FCN2Q15485 313 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 TERF2Q15554 542 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 ADRM1Q16186 407 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 ZNF672Q499Z4 452 aaPredicted RBP1.34□□□□□ -2.19
LMBR1-222ENST00000638959 AWAT1Q58HT5 328 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 WASHC2DQ5SRD0 308 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 TAF2Q6P1X5 1199 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 SPSB3Q6PJ21 355 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 SUSD1Q6UWL2 747 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 PRSS57Q6UWY2 283 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 ZNF365Q70YC5 407 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 DGLUCYQ7Z3D6 616 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 DAAM2Q86T65 1068 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 DCBLD1Q8N8Z6 715 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 PSD4Q8NDX1 1056 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 EAF2Q96CJ1 260 aaPredicted RBP1.34□□□□□ -2.19
LMBR1-222ENST00000638959 CCDC17Q96LX7 622 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 GFRA4Q9GZZ7 299 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 GREM2Q9H772 168 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 JKAMPQ9P055 326 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 SLC45A2Q9UMX9 530 aa1.34□□□□□ -2.19
LMBR1-222ENST00000638959 MYBBP1AQ9BQG0 1328 aaKnown RBP1.34□□□□□ -2.2
LMBR1-222ENST00000638959 EVPLQ92817 2033 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 BTBD18B2RXH4 712 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 E9PLN8 166 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 ZC3H11AO75152 810 aaKnown RBP eCLIP1.33□□□□□ -2.2
LMBR1-222ENST00000638959 SLC43A1O75387 559 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 EPN2O95208 641 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 F2P00734 622 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 IGLV2-11P01706 119 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 DLX5P56178 289 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 ATP8B2P98198 1209 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 B4GALNT1Q00973 533 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 PPP3CAQ08209 521 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 SEC23BQ15437 767 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 CPEB4Q17RY0 729 aaKnown RBP eCLIP1.33□□□□□ -2.2
LMBR1-222ENST00000638959 SLC4A8Q2Y0W8 1093 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 ZIK1Q3SY52 487 aaPredicted RBP1.33□□□□□ -2.2
LMBR1-222ENST00000638959 PABPC1LQ4VXU2 614 aaKnown RBP1.33□□□□□ -2.2
LMBR1-222ENST00000638959 MUM1L1Q5H9M0 696 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 KIAA1755Q5JYT7 1200 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 MEX3BQ6ZN04 569 aaKnown RBP1.33□□□□□ -2.2
LMBR1-222ENST00000638959 COL23A1Q86Y22 540 aaPredicted RBP1.33□□□□□ -2.2
LMBR1-222ENST00000638959 LIX1LQ8IVB5 337 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 AOPEPQ8N6M6 819 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 ZSWIM2Q8NEG5 633 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 FATE1Q969F0 183 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 ZNF524Q96C55 264 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 R3HDM4Q96D70 268 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 LENG8Q96PV6 779 aaPredicted RBP1.33□□□□□ -2.2
LMBR1-222ENST00000638959 VKORC1Q9BQB6 163 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 THAP7Q9BT49 309 aaPredicted RBP1.33□□□□□ -2.2
LMBR1-222ENST00000638959 ADI1Q9BV57 179 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 SEZ6LQ9BYH1 1024 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 RETREG1Q9H6L5 497 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 GLOD4Q9HC38 313 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 SCOCQ9UIL1 159 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 ZBTB21Q9ULJ3 1066 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 COG5Q9UP83 839 aa1.33□□□□□ -2.2
LMBR1-222ENST00000638959 TTBK1Q5TCY1 1321 aaPredicted RBP1.33□□□□□ -2.2
LMBR1-222ENST00000638959 PLD2O14939 933 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 TJP3O95049 919 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 DLDP09622 509 aaKnown RBP1.32□□□□□ -2.2
LMBR1-222ENST00000638959 TBXAS1P24557 533 aaPredicted RBP1.32□□□□□ -2.2
LMBR1-222ENST00000638959 POLD2P49005 469 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 CRIP2P52943 208 aaPredicted RBP1.32□□□□□ -2.2
LMBR1-222ENST00000638959 CTXN1P60606 82 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 DSG1Q02413 1049 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 POU3F1Q03052 451 aaPredicted RBP1.32□□□□□ -2.2
LMBR1-222ENST00000638959 COASYQ13057 564 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 STIM1Q13586 685 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 PTGR1Q14914 329 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 SEPT2Q15019 361 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 ODF3L2Q3SX64 289 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 FLYWCH1Q4VC44 716 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 C14orf177Q52M58 125 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 INO80DQ53TQ3 878 aaPredicted RBP1.32□□□□□ -2.2
LMBR1-222ENST00000638959 NAALADL2Q58DX5 795 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 RNASE12Q5GAN4 147 aaKnown RBP1.32□□□□□ -2.2
LMBR1-222ENST00000638959 PMS2CLQ68D20 193 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 CYB5RLQ6IPT4 315 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 TRILQ7L0X0 811 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 SRGAP1Q7Z6B7 1085 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 LYG1Q8N1E2 194 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 TSPEARQ8WU66 669 aa1.32□□□□□ -2.2
LMBR1-222ENST00000638959 IGFBPL1Q8WX77 278 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms