RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 RECQLP46063 649 aaPredicted RBP4.49□□□□□ -1.69
CCDC7-211ENST00000638889 MAP2K6P52564 334 aa4.49□□□□□ -1.69
CCDC7-211ENST00000638889 LILRA4P59901 499 aa4.49□□□□□ -1.69
CCDC7-211ENST00000638889 GPSM2P81274 684 aa4.49□□□□□ -1.69
CCDC7-211ENST00000638889 SATB1Q01826 763 aa4.49□□□□□ -1.69
CCDC7-211ENST00000638889 TWIST1Q15672 202 aa4.49□□□□□ -1.69
CCDC7-211ENST00000638889 ZNF260Q3ZCT1 412 aa4.49□□□□□ -1.69
CCDC7-211ENST00000638889 KLHL22Q53GT1 634 aa4.49□□□□□ -1.69
CCDC7-211ENST00000638889 USP45Q70EL2 814 aa4.49□□□□□ -1.69
CCDC7-211ENST00000638889 SAMD14Q8IZD0 417 aaPredicted RBP4.49□□□□□ -1.69
CCDC7-211ENST00000638889 BRIX1Q8TDN6 353 aaKnown RBP4.49□□□□□ -1.69
CCDC7-211ENST00000638889 SNX18Q96RF0 628 aa4.49□□□□□ -1.69
CCDC7-211ENST00000638889 FAM118BQ9BPY3 351 aa4.49□□□□□ -1.69
CCDC7-211ENST00000638889 ADGRE3Q9BY15 652 aa4.49□□□□□ -1.69
CCDC7-211ENST00000638889 PDGFCQ9NRA1 345 aa4.49□□□□□ -1.69
CCDC7-211ENST00000638889 NDRG4Q9ULP0 352 aaKnown RBP4.49□□□□□ -1.69
CCDC7-211ENST00000638889 SHOC2Q9UQ13 582 aa4.49□□□□□ -1.69
CCDC7-211ENST00000638889 PLEKHM1Q9Y4G2 1056 aa4.49□□□□□ -1.69
CCDC7-211ENST00000638889 PCDHA1Q9Y5I3 950 aa4.49□□□□□ -1.69
CCDC7-211ENST00000638889 KATNA1O75449 491 aa4.48□□□□□ -1.69
CCDC7-211ENST00000638889 PRKCBP05771 671 aa4.48□□□□□ -1.69
CCDC7-211ENST00000638889 SNHG28P0DPA3 235 aa4.48□□□□□ -1.69
CCDC7-211ENST00000638889 EXOSC9Q06265 439 aaKnown RBP4.48□□□□□ -1.69
CCDC7-211ENST00000638889 GPR162Q16538 588 aa4.48□□□□□ -1.69
CCDC7-211ENST00000638889 FCRL6Q6DN72 434 aa4.48□□□□□ -1.69
CCDC7-211ENST00000638889 RGS7BPQ6MZT1 257 aaPredicted RBP4.48□□□□□ -1.69
CCDC7-211ENST00000638889 KIRREL2Q6UWL6 708 aa4.48□□□□□ -1.69
CCDC7-211ENST00000638889 TERB1Q8NA31 727 aa4.48□□□□□ -1.69
CCDC7-211ENST00000638889 XAGE5Q8WWM1 108 aa4.48□□□□□ -1.69
CCDC7-211ENST00000638889 SOCS4Q8WXH5 440 aa4.48□□□□□ -1.69
CCDC7-211ENST00000638889 R3HDM4Q96D70 268 aa4.48□□□□□ -1.69
CCDC7-211ENST00000638889 CAMKK2Q96RR4 588 aa4.48□□□□□ -1.69
CCDC7-211ENST00000638889 CCNL1Q9UK58 526 aaPredicted RBP4.48□□□□□ -1.69
CCDC7-211ENST00000638889 AFG3L2Q9Y4W6 797 aa4.48□□□□□ -1.69
CCDC7-211ENST00000638889 CADPSQ9ULU8 1353 aa4.48□□□□□ -1.69
CCDC7-211ENST00000638889 SBNO2Q9Y2G9 1366 aa4.48□□□□□ -1.69
CCDC7-211ENST00000638889 H3BNC9 293 aa4.47□□□□□ -1.69
CCDC7-211ENST00000638889 POU2F2P09086 479 aa4.47□□□□□ -1.69
CCDC7-211ENST00000638889 CYP2C9P11712 490 aa4.47□□□□□ -1.69
CCDC7-211ENST00000638889 ATP5F1P24539 256 aaPredicted RBP4.47□□□□□ -1.69
CCDC7-211ENST00000638889 IL1R2P27930 398 aa4.47□□□□□ -1.69
CCDC7-211ENST00000638889 TKTP29401 623 aaKnown RBP4.47□□□□□ -1.69
CCDC7-211ENST00000638889 LRPAP1P30533 357 aa4.47□□□□□ -1.69
CCDC7-211ENST00000638889 CDKN1CP49918 316 aaPredicted RBP4.47□□□□□ -1.69
CCDC7-211ENST00000638889 NKX6-1P78426 367 aaPredicted RBP4.47□□□□□ -1.69
CCDC7-211ENST00000638889 Q4G0T1 1027 aa4.47□□□□□ -1.69
CCDC7-211ENST00000638889 RNF187Q5TA31 235 aaPredicted RBP4.47□□□□□ -1.69
CCDC7-211ENST00000638889 ZNF813Q6ZN06 617 aa4.47□□□□□ -1.69
CCDC7-211ENST00000638889 ZDHHC17Q8IUH5 632 aa4.47□□□□□ -1.69
CCDC7-211ENST00000638889 COQ8BQ96D53 544 aa4.47□□□□□ -1.69
CCDC7-211ENST00000638889 ZC3H10Q96K80 434 aaKnown RBP4.47□□□□□ -1.69
CCDC7-211ENST00000638889 TRNAU1APQ9NX07 287 aaKnown RBP4.47□□□□□ -1.69
CCDC7-211ENST00000638889 H3BUI4 141 aa4.46□□□□□ -1.7
CCDC7-211ENST00000638889 EXOC3O60645 756 aa4.46□□□□□ -1.7
CCDC7-211ENST00000638889 UNC5CO95185 931 aa4.46□□□□□ -1.7
CCDC7-211ENST00000638889 GRPP07492 148 aa4.46□□□□□ -1.7
CCDC7-211ENST00000638889 CYP2A6P11509 494 aaPredicted RBP4.46□□□□□ -1.7
CCDC7-211ENST00000638889 HDCP19113 662 aa4.46□□□□□ -1.7
CCDC7-211ENST00000638889 PDE6CP51160 858 aa4.46□□□□□ -1.7
CCDC7-211ENST00000638889 PLS1Q14651 629 aa4.46□□□□□ -1.7
CCDC7-211ENST00000638889 PGS1Q32NB8 556 aa4.46□□□□□ -1.7
CCDC7-211ENST00000638889 TMEM240Q5SV17 173 aa4.46□□□□□ -1.7
CCDC7-211ENST00000638889 MEX3CQ5U5Q3 659 aaKnown RBP4.46□□□□□ -1.7
CCDC7-211ENST00000638889 NANOGP1Q8N7R0 232 aa4.46□□□□□ -1.7
CCDC7-211ENST00000638889 C16orf52Q8NHV5 167 aa4.46□□□□□ -1.7
CCDC7-211ENST00000638889 LENG8Q96PV6 779 aaPredicted RBP4.46□□□□□ -1.7
CCDC7-211ENST00000638889 EBF3Q9H4W6 596 aa4.46□□□□□ -1.7
CCDC7-211ENST00000638889 TFCP2L1Q9NZI6 479 aa4.46□□□□□ -1.7
CCDC7-211ENST00000638889 ZNF580Q9UK33 172 aa4.46□□□□□ -1.7
CCDC7-211ENST00000638889 SCAF8Q9UPN6 1271 aaKnown RBP4.46□□□□□ -1.7
CCDC7-211ENST00000638889 FCHO1O14526 889 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 SNUPNO95149 360 aaKnown RBP4.45□□□□□ -1.7
CCDC7-211ENST00000638889 THP07101 528 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 TMEM191BP0C7N4 346 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 MYCLP12524 364 aaPredicted RBP4.45□□□□□ -1.7
CCDC7-211ENST00000638889 XRCC6P12956 609 aaKnown RBP eCLIP4.45□□□□□ -1.7
CCDC7-211ENST00000638889 RENBPP51606 427 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 SOX8P57073 446 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 HTRA4P83105 476 aaPredicted RBP4.45□□□□□ -1.7
CCDC7-211ENST00000638889 C4orf46Q504U0 113 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 RUSC1-AS1Q66K80 236 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 SERPINA13PQ6UXR4 307 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 PRPF38AQ8NAV1 312 aaKnown RBP4.45□□□□□ -1.7
CCDC7-211ENST00000638889 PCSK9Q8NBP7 692 aaKnown RBP4.45□□□□□ -1.7
CCDC7-211ENST00000638889 NSMCE1Q8WV22 266 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 RSPRY1Q96DX4 576 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 SLC35A4Q96G79 324 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 CDK5RAP3Q96JB5 506 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 FYTTD1Q96QD9 318 aaKnown RBP4.45□□□□□ -1.7
CCDC7-211ENST00000638889 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 SARS2Q9NP81 518 aaKnown RBP4.45□□□□□ -1.7
CCDC7-211ENST00000638889 KLHL13Q9P2N7 655 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 XPR1Q9UBH6 696 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 WASHC2CQ9Y4E1 1318 aa4.45□□□□□ -1.7
CCDC7-211ENST00000638889 BTBD19C9JJ37 291 aa4.44□□□□□ -1.7
CCDC7-211ENST00000638889 DSCR3O14972 297 aa4.44□□□□□ -1.7
CCDC7-211ENST00000638889 PDE8BO95263 885 aa4.44□□□□□ -1.7
CCDC7-211ENST00000638889 CSF1RP07333 972 aa4.44□□□□□ -1.7
CCDC7-211ENST00000638889 AKAP5P24588 427 aa4.44□□□□□ -1.7
CCDC7-211ENST00000638889 KCNJ5P48544 419 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms