RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 CRTAC1Q9NQ79 661 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 CDH9Q9ULB4 789 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 MYO16Q9Y6X6 1858 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 TRAV19A0A0A6YYK7 116 aa18.04■□□□□ 0.48
SMN2-216ENST00000638794 CUTAO60888 179 aa18.04■□□□□ 0.48
SMN2-216ENST00000638794 CKMP06732 381 aa18.04■□□□□ 0.48
SMN2-216ENST00000638794 PDGFRLQ15198 375 aa18.04■□□□□ 0.48
SMN2-216ENST00000638794 ZNF77Q15935 545 aa18.04■□□□□ 0.48
SMN2-216ENST00000638794 FOXD4L5Q5VV16 416 aaPredicted RBP18.04■□□□□ 0.48
SMN2-216ENST00000638794 TRAPPC11Q7Z392 1133 aa18.04■□□□□ 0.48
SMN2-216ENST00000638794 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.04■□□□□ 0.48
SMN2-216ENST00000638794 WDR5BQ86VZ2 330 aa18.04■□□□□ 0.48
SMN2-216ENST00000638794 RDH13Q8NBN7 331 aa18.04■□□□□ 0.48
SMN2-216ENST00000638794 TTC16Q8NEE8 873 aa18.04■□□□□ 0.48
SMN2-216ENST00000638794 FOXD4L4Q8WXT5 416 aaPredicted RBP18.04■□□□□ 0.48
SMN2-216ENST00000638794 C7orf25Q9BPX7 421 aa18.04■□□□□ 0.48
SMN2-216ENST00000638794 AGPAT3Q9NRZ7 376 aa18.04■□□□□ 0.48
SMN2-216ENST00000638794 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.04■□□□□ 0.48
SMN2-216ENST00000638794 SDK1Q7Z5N4 2213 aa18.04■□□□□ 0.48
SMN2-216ENST00000638794 EML5Q05BV3 1969 aa18.04■□□□□ 0.48
SMN2-216ENST00000638794 KIAA1549LQ6ZVL6 1849 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 C2orf78A6NCI8 922 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 CLIC2O15247 247 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 LRP3O75074 770 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 RNF40O75150 1001 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 EGFP01133 1207 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 PDGFRBP09619 1106 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 USP17L7P0C7H9 530 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 DLATP10515 647 aaKnown RBP18.03■□□□□ 0.48
SMN2-216ENST00000638794 WARSP23381 471 aaKnown RBP18.03■□□□□ 0.48
SMN2-216ENST00000638794 BDNFP23560 247 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 CASP1P29466 404 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 AMPD2Q01433 879 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 USP4Q13107 963 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 NAIF1Q69YI7 327 aaPredicted RBP18.03■□□□□ 0.48
SMN2-216ENST00000638794 VSTM1Q6UX27 236 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 ARL14EPQ8N8R7 260 aaPredicted RBP18.03■□□□□ 0.48
SMN2-216ENST00000638794 FSIP1Q8NA03 581 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 OSCP1Q8WVF1 389 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 SCFD1Q8WVM8 642 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 MMS19Q96T76 1030 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 FBRSL1Q9HCM7 1045 aaKnown RBP18.03■□□□□ 0.48
SMN2-216ENST00000638794 DUS2Q9NX74 493 aaKnown RBP18.03■□□□□ 0.48
SMN2-216ENST00000638794 GCNT4Q9P109 453 aa18.03■□□□□ 0.48
SMN2-216ENST00000638794 MAGEC2Q9UBF1 373 aaPredicted RBP18.03■□□□□ 0.48
SMN2-216ENST00000638794 UBE4BO95155 1302 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 POLR2DO15514 142 aaKnown RBP18.02■□□□□ 0.48
SMN2-216ENST00000638794 CST3P01034 146 aaPredicted RBP18.02■□□□□ 0.48
SMN2-216ENST00000638794 TNNI1P19237 187 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 GJA4P35212 333 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 GRIK1P39086 918 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 PXNP49023 591 aaPredicted RBP18.02■□□□□ 0.48
SMN2-216ENST00000638794 GALK1P51570 392 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 CYP2J2P51589 502 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 CYP27A1Q02318 531 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 CYP24A1Q07973 514 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 EHHADHQ08426 723 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 MAPRE1Q15691 268 aaKnown RBP18.02■□□□□ 0.48
SMN2-216ENST00000638794 FOXD4L6Q3SYB3 417 aaPredicted RBP18.02■□□□□ 0.48
SMN2-216ENST00000638794 FOXD4L3Q6VB84 417 aaPredicted RBP18.02■□□□□ 0.48
SMN2-216ENST00000638794 UNC13DQ70J99 1090 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 CEP68Q76N32 757 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 NELFCDQ8IXH7 590 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 CPA6Q8N4T0 437 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 FAM160A2Q8N612 972 aaPredicted RBP18.02■□□□□ 0.48
SMN2-216ENST00000638794 MYCBPAPQ8TBZ2 947 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 CCDC127Q96BQ5 260 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 PCED1BQ96HM7 432 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 SPATA17Q96L03 361 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 FNBP1Q96RU3 617 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 CGRRF1Q99675 332 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 P2RY13Q9BPV8 354 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 MRPL45Q9BRJ2 306 aaKnown RBP18.02■□□□□ 0.48
SMN2-216ENST00000638794 ECT2Q9H8V3 914 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 SEMA4GQ9NTN9 838 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 NME7Q9Y5B8 376 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 WNT6Q9Y6F9 365 aa18.02■□□□□ 0.48
SMN2-216ENST00000638794 ATG13O75143 517 aa18.01■□□□□ 0.47
SMN2-216ENST00000638794 DRD1P21728 446 aa18.01■□□□□ 0.47
SMN2-216ENST00000638794 IFNAR2P48551 515 aa18.01■□□□□ 0.47
SMN2-216ENST00000638794 USP46P62068 366 aa18.01■□□□□ 0.47
SMN2-216ENST00000638794 KCNB1Q14721 858 aa18.01■□□□□ 0.47
SMN2-216ENST00000638794 PSMD6Q15008 389 aa18.01■□□□□ 0.47
SMN2-216ENST00000638794 EML3Q32P44 896 aa18.01■□□□□ 0.47
SMN2-216ENST00000638794 DENND5BQ6ZUT9 1274 aa18.01■□□□□ 0.47
SMN2-216ENST00000638794 XXYLT1Q8NBI6 393 aa18.01■□□□□ 0.47
SMN2-216ENST00000638794 SH3RF2Q8TEC5 729 aa18.01■□□□□ 0.47
SMN2-216ENST00000638794 RTKNQ9BST9 563 aa18.01■□□□□ 0.47
SMN2-216ENST00000638794 GZF1Q9H116 711 aaPredicted RBP18.01■□□□□ 0.47
SMN2-216ENST00000638794 BLZF1Q9H2G9 400 aa18.01■□□□□ 0.47
SMN2-216ENST00000638794 MAGEF1Q9HAY2 307 aa18.01■□□□□ 0.47
SMN2-216ENST00000638794 POLR3BQ9NW08 1133 aaPredicted RBP18.01■□□□□ 0.47
SMN2-216ENST00000638794 SLC8A2Q9UPR5 921 aa18.01■□□□□ 0.47
SMN2-216ENST00000638794 DCDC2BA2VCK2 349 aa18■□□□□ 0.47
SMN2-216ENST00000638794 TACC1O75410 805 aa18■□□□□ 0.47
SMN2-216ENST00000638794 HDCP19113 662 aa18■□□□□ 0.47
SMN2-216ENST00000638794 ANXA13P27216 316 aa18■□□□□ 0.47
SMN2-216ENST00000638794 SNRPFP62306 86 aaKnown RBP18■□□□□ 0.47
SMN2-216ENST00000638794 CSRP2Q16527 193 aa18■□□□□ 0.47
SMN2-216ENST00000638794 MDH1BQ5I0G3 518 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms