RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 ETV4P43268 484 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 ALDH1A3P47895 512 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 FMO5P49326 533 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 HIRAP54198 1017 aaPredicted RBP12.55□□□□□ -0.4
CAPN3-221ENST00000638141 TUBA4AP68366 448 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 MESDQ14696 234 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 C12orf60Q5U649 245 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 CYP4F22Q6NT55 531 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 KBTBD6Q86V97 674 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 TICAM1Q8IUC6 712 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 TTC13Q8NBP0 860 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 TCP10LQ8TDR4 215 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 NSUN4Q96CB9 384 aaKnown RBP12.55□□□□□ -0.4
CAPN3-221ENST00000638141 GPATCH1Q9BRR8 931 aaKnown RBP12.55□□□□□ -0.4
CAPN3-221ENST00000638141 SLC2A11Q9BYW1 496 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 DRC3Q9H069 523 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 INTS2Q9H0H0 1204 aaKnown RBP12.55□□□□□ -0.4
CAPN3-221ENST00000638141 PARVBQ9HBI1 364 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 CNTN3Q9P232 1028 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 ARMCX1Q9P291 453 aa12.55□□□□□ -0.4
CAPN3-221ENST00000638141 ALOX15BO15296 676 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 ESRRBO95718 433 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 CRTAMO95727 393 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 SERPINA6P08185 405 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 RBP3P10745 1247 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 THRAP10827 490 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 GAP43P17677 238 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 LRRC36Q1X8D7 754 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 ADGRD1Q6QNK2 874 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 CLEC4GQ6UXB4 293 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 PALB2Q86YC2 1186 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 ANKRD36BP1Q96IX9 119 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 GCNAQ96QF7 691 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 RANBP9Q96S59 729 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 TMEM47Q9BQJ4 181 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 TUT1Q9H6E5 874 aaKnown RBP12.54□□□□□ -0.4
CAPN3-221ENST00000638141 GNPTGQ9UJJ9 305 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 CCNL1Q9UK58 526 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-221ENST00000638141 STRIP2Q9ULQ0 834 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 PSMD13Q9UNM6 376 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 INPP5FQ9Y2H2 1132 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 SNX9Q9Y5X1 595 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 AP4B1Q9Y6B7 739 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 ASTN2O75129 1339 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-221ENST00000638141 F5H6K3 240 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 EIF3FO00303 357 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-221ENST00000638141 SRGAP2CP0DJJ0 459 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 SRGAP2BP0DMP2 458 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 KLRC2P26717 231 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 ZNF200P98182 395 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-221ENST00000638141 PTP4A2Q12974 167 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 CCNG2Q16589 344 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 GRAMD1BQ3KR37 738 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 ALYREFQ86V81 257 aaKnown RBP12.54□□□□□ -0.4
CAPN3-221ENST00000638141 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.54□□□□□ -0.4
CAPN3-221ENST00000638141 DDHD1Q8NEL9 900 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 ACTRT2Q8TDY3 377 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 SLC26A7Q8TE54 656 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 PWWP2AQ96N64 755 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 PRPF18Q99633 342 aaKnown RBP12.54□□□□□ -0.4
CAPN3-221ENST00000638141 INO80BQ9C086 356 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-221ENST00000638141 CCDC68Q9H2F9 335 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 SAYSD1Q9NPB0 183 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 QPCTLQ9NXS2 382 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 GTF3C4Q9UKN8 822 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 PCDHA12Q9UN75 941 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 SPO11Q9Y5K1 396 aa12.54□□□□□ -0.4
CAPN3-221ENST00000638141 DCAF8L1A6NGE4 600 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 EDIL3O43854 480 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 FAM155BO75949 473 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 FUCA1P04066 466 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 POLR2MP0CAP2 368 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 ATP6V1B1P15313 513 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 RAG1P15918 1043 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 ACAT1P24752 427 aaKnown RBP12.53□□□□□ -0.4
CAPN3-221ENST00000638141 HOXD13P35453 343 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 STT3AP46977 705 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 CHRNDQ07001 517 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 ITPK1Q13572 414 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 SEPT6Q14141 434 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 CNGA3Q16281 694 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 LPCAT2Q7L5N7 544 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 PQLC1Q8N2U9 271 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 SLC25A41Q8N5S1 370 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 ADCY4Q8NFM4 1077 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 ZNF564Q8TBZ8 553 aaPredicted RBP12.53□□□□□ -0.4
CAPN3-221ENST00000638141 PPP4R1Q8TF05 950 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 HAS1Q92839 578 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 LRGUKQ96M69 825 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 OLFM1Q99784 485 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 RIOX1Q9H6W3 641 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 DKK3Q9UBP4 350 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 HERC5Q9UII4 1024 aaKnown RBP12.53□□□□□ -0.4
CAPN3-221ENST00000638141 KIAA1024Q9UPX6 916 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 B3GNT3Q9Y2A9 372 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 ATRNL1Q5VV63 1379 aa12.53□□□□□ -0.4
CAPN3-221ENST00000638141 CAPN8A6NHC0 703 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 FAM47E-STBD1D6RA91 191 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 E9PMD0 336 aa12.52□□□□□ -0.4
CAPN3-221ENST00000638141 SPTLC1O15269 473 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms