RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CD48P09326 243 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 MIPP30301 263 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 RELL1Q8IUW5 271 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 C10orf67Q8IYJ2 551 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 C9orf72Q96LT7 481 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 RBM15Q96T37 977 aaKnown RBP eCLIP22.6■■□□□ 1.212e-7■■■■□ 25.8
CLN6-224ENST00000638076 FAM124BQ9H5Z6 455 aaPredicted RBP22.6■■□□□ 1.21
CLN6-224ENST00000638076 SLC5A4Q9NY91 659 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 KIAA1257Q9ULG3 409 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 HES2Q9Y543 173 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 NRCAMQ92823 1304 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 A6NJR5 290 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 SGK1O00141 431 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 TAOK1Q7L7X3 1001 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 EXOC3L1Q86VI1 746 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 KCTD6Q8NC69 237 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 SLC35B2Q8TB61 432 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 SNX27Q96L92 541 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 CPA4Q9UI42 421 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 TPX2Q9ULW0 747 aaKnown RBP22.6■■□□□ 1.21
CLN6-224ENST00000638076 USP18Q9UMW8 372 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 SNX9Q9Y5X1 595 aa22.6■■□□□ 1.21
CLN6-224ENST00000638076 E5RJQ4 531 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 F2P00734 622 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 IFNB1P01574 187 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 OTUD4Q01804 1114 aaKnown RBP22.59■■□□□ 1.21
CLN6-224ENST00000638076 ACAP1Q15027 740 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 TAF5Q15542 800 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 APBB1IPQ7Z5R6 666 aaPredicted RBP22.59■■□□□ 1.21
CLN6-224ENST00000638076 ACTL9Q8TC94 416 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 HSPH1Q92598 858 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 KAT2BQ92831 832 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 MRPL45Q9BRJ2 306 aaKnown RBP22.59■■□□□ 1.21
CLN6-224ENST00000638076 FOXP3Q9BZS1 431 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 ASNSD1Q9NWL6 643 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 TUBGCP4Q9UGJ1 667 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 DERAQ9Y315 318 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 PFKMP08237 780 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 YARSP54577 528 aaKnown RBP22.59■■□□□ 1.21
CLN6-224ENST00000638076 CDC42EP1Q00587 391 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 PDE4CQ08493 712 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 TAZQ16635 292 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 OR6B2Q6IFH4 312 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 NOTUMQ6P988 496 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 FAM183BPQ6ZVS7 135 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 LENG1Q96BZ8 264 aaPredicted RBP22.59■■□□□ 1.21
CLN6-224ENST00000638076 CTNNAL1Q9UBT7 734 aa22.59■■□□□ 1.21
CLN6-224ENST00000638076 GNEQ9Y223 722 aaKnown RBP22.59■■□□□ 1.21
CLN6-224ENST00000638076 TRUB2O95900 331 aaKnown RBP22.58■■□□□ 1.21
CLN6-224ENST00000638076 CYP2C9P11712 490 aa22.58■■□□□ 1.21
CLN6-224ENST00000638076 MAGEA4P43358 317 aa22.58■■□□□ 1.21
CLN6-224ENST00000638076 ZNF143P52747 638 aaPredicted RBP22.58■■□□□ 1.21
CLN6-224ENST00000638076 GOLGA7BQ2TAP0 167 aa22.58■■□□□ 1.21
CLN6-224ENST00000638076 GLRA4Q5JXX5 417 aa22.58■■□□□ 1.21
CLN6-224ENST00000638076 PPP1R26Q5T8A7 1209 aaPredicted RBP22.58■■□□□ 1.21
CLN6-224ENST00000638076 BBS12Q6ZW61 710 aa22.58■■□□□ 1.21
CLN6-224ENST00000638076 SPATS2Q86XZ4 545 aaKnown RBP22.58■■□□□ 1.21
CLN6-224ENST00000638076 ATXN2LQ8WWM7 1075 aaKnown RBP22.58■■□□□ 1.21
CLN6-224ENST00000638076 PIWIL1Q96J94 861 aaKnown RBP22.58■■□□□ 1.21
CLN6-224ENST00000638076 IRX5P78411 483 aaPredicted RBP22.58■■□□□ 1.2
CLN6-224ENST00000638076 QPCTQ16769 361 aa22.58■■□□□ 1.2
CLN6-224ENST00000638076 SH3PXD2AQ5TCZ1 1133 aa22.58■■□□□ 1.2
CLN6-224ENST00000638076 CEP128Q6ZU80 1094 aa22.58■■□□□ 1.2
CLN6-224ENST00000638076 CMASQ8NFW8 434 aaPredicted RBP22.58■■□□□ 1.2
CLN6-224ENST00000638076 ARHGEF2Q92974 986 aaKnown RBP22.58■■□□□ 1.2
CLN6-224ENST00000638076 C18orf25Q96B23 403 aaPredicted RBP22.58■■□□□ 1.2
CLN6-224ENST00000638076 PCDH9Q9HC56 1237 aa22.58■■□□□ 1.2
CLN6-224ENST00000638076 SMIM35A0A1B0GVV1 85 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 PECAM1P16284 738 aaPredicted RBP22.57■■□□□ 1.2
CLN6-224ENST00000638076 GPD1P21695 349 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 TRNP1Q6NT89 227 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 ACOT1Q86TX2 421 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 TTC13Q8NBP0 860 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 NXF3Q9H4D5 531 aaKnown RBP22.57■■□□□ 1.2
CLN6-224ENST00000638076 C10orf88Q9H8K7 445 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 SAYSD1Q9NPB0 183 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 RNF19AQ9NV58 838 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 INTS9Q9NV88 658 aaKnown RBP22.57■■□□□ 1.2
CLN6-224ENST00000638076 TRIP11Q15643 1979 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 MBLAC1A4D2B0 266 aaPredicted RBP22.57■■□□□ 1.2
CLN6-224ENST00000638076 TCEA3O75764 348 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 GRAP2O75791 330 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 DARSP14868 501 aaKnown RBP22.57■■□□□ 1.2
CLN6-224ENST00000638076 PCK1P35558 622 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 RGS7P49802 495 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 MORF4L2Q15014 288 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 STILQ15468 1287 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 ZBTB6Q15916 424 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 MORN1Q5T089 497 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 CYP4F22Q6NT55 531 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 TLK2Q86UE8 772 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 RFX6Q8HWS3 928 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 BEST2Q8NFU1 509 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 RXFP2Q8WXD0 754 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 PEBP4Q96S96 227 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 TRIM6Q9C030 488 aaPredicted RBP22.57■■□□□ 1.2
CLN6-224ENST00000638076 MIS12Q9H081 205 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 FLRT1Q9NZU1 646 aa22.57■■□□□ 1.2
CLN6-224ENST00000638076 C2CD4BA6NLJ0 364 aa22.56■■□□□ 1.2
CLN6-224ENST00000638076 PDGFRAP16234 1089 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms