RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 TAP1Q03518 808 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 PPP2R3BQ9Y5P8 575 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 MCAMP43121 646 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 UBASH3BQ8TF42 649 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 RAD54LQ92698 747 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 MS4A14Q96JA4 679 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 DBR1Q9UK59 544 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 SRP72O76094 671 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 ZNF24P17028 368 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 LIFRP42702 1097 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 GLRA4Q5JXX5 417 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 EMBQ6PCB8 327 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 CCDC185Q8N715 623 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 AVENQ9NQS1 362 aaPredicted RBP16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 SH3BGRLO75368 114 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 PMPCBO75439 489 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 PPP2R2AP63151 447 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 MICALL2Q8IY33 904 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 ENGASEQ8NFI3 743 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 TNFSF13BQ9Y275 285 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 SH3GLB1Q9Y371 365 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 FNTAP49354 379 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 STX3Q13277 289 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 RNF19BQ6ZMZ0 732 aa16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 TRMT11Q7Z4G4 463 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.94■□□□□ 0.3
CACNA1A-258ENST00000638029 SNPHO15079 494 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 CPT1AP50416 773 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 CEBPGP53567 150 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 DNAJC3Q13217 504 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 CCDC137Q6PK04 289 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 SLC13A5Q86YT5 568 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 CATSPER1Q8NEC5 780 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 SNF8Q96H20 258 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 TPD52L3Q96J77 140 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 PHACTR1Q9C0D0 580 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 RAD21L1Q9H4I0 556 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 LTKP29376 864 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 RRAGCQ9HB90 399 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 RAG1P15918 1043 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 IZUMO3Q5VZ72 239 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 MOSPD2Q8NHP6 518 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 MDM1Q8TC05 714 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 RNF112Q9ULX5 631 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 PCDHB12Q9Y5F1 795 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 ASB14A6NK59 587 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 TCEA3O75764 348 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 PRKCBP05771 671 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 SCP2P22307 547 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 DRAP1Q14919 205 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 TTC39CQ8N584 583 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 PIH1D3Q9NQM4 214 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 MFAP3LO75121 409 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 CYFIP2Q96F07 1278 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 FAM20AQ96MK3 541 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 FAM129BQ96TA1 746 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 PARK7Q99497 189 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 EIF2AK1Q9BQI3 630 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 SERHL2Q9H4I8 314 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 SERHLQ9NQF3 203 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 RCOR1Q9UKL0 485 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 SPHKAPQ2M3C7 1700 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 C16orf96A6NNT2 1141 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 NPTXRO95502 500 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 TMC7Q7Z402 723 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 CENPLQ8N0S6 344 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 PIGBQ92521 554 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 SKA1Q96BD8 255 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 CYP39A1Q9NYL5 469 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 UTYO14607 1347 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 TMEM94Q12767 1356 aa16.93■□□□□ 0.3
CACNA1A-258ENST00000638029 LBPP18428 481 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 EIF2B2P49770 351 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 ARMC4Q5T2S8 1044 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 TRIM39Q9HCM9 518 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 POLR1AO95602 1720 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 PDZK1P1A8MUH7 402 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 CDC40O60508 579 aaKnown RBP eCLIP16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 USP1O94782 785 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 ZNF682O95780 498 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 MIB1Q86YT6 1006 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 SLC44A5Q8NCS7 719 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 LNPEPQ9UIQ6 1025 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 CDC42BPBQ9Y5S2 1711 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 MSH4O15457 936 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 EFCAB12Q6NXP0 572 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 PRPF39Q86UA1 669 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 CDKL3Q8IVW4 592 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 GLT1D1Q96MS3 346 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 TMEM39AQ9NV64 488 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 RRM2P31350 389 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 PFKFB3Q16875 520 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 ABCG4Q9H172 646 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 KCTD10Q9H3F6 313 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 KLHL20Q9Y2M5 609 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 RPAP1Q9BWH6 1393 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 IFRD1O00458 451 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 CPA2P48052 419 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 NCF4Q15080 339 aa16.92■□□□□ 0.3
CACNA1A-258ENST00000638029 FNDC3BQ53EP0 1204 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms