RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 BPIFB1Q8TDL5 484 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 TMEM174Q8WUU8 243 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 FAM3CQ92520 227 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 USP13Q92995 863 aaPredicted RBP18.92■□□□□ 0.62
PNKP-230ENST00000638016 CCDC47Q96A33 483 aaKnown RBP18.92■□□□□ 0.62
PNKP-230ENST00000638016 BCO2Q9BYV7 579 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 IRF2BPLQ9H1B7 796 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 MMRN2Q9H8L6 949 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 TRPC7Q9HCX4 862 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 SPATA6Q9NWH7 488 aaPredicted RBP18.92■□□□□ 0.62
PNKP-230ENST00000638016 HMGXB4Q9UGU5 601 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 PTPRZ1P23471 2315 aaPredicted RBP18.92■□□□□ 0.62
PNKP-230ENST00000638016 FANCMQ8IYD8 2048 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 FAM186AA6NE01 2351 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 SP9P0CG40 484 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 PTPN1P18031 435 aaKnown RBP18.91■□□□□ 0.62
PNKP-230ENST00000638016 ATICP31939 592 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 GRIK1P39086 918 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 MAGEA11P43364 429 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 ZACNQ401N2 412 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 ZCWPW2Q504Y3 356 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 TRIM68Q6AZZ1 485 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 GUF1Q8N442 669 aaKnown RBP18.91■□□□□ 0.62
PNKP-230ENST00000638016 TTC16Q8NEE8 873 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 TMC2Q8TDI7 906 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 MRPS31Q92665 395 aaKnown RBP18.91■□□□□ 0.62
PNKP-230ENST00000638016 E2F7Q96AV8 911 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 CLDN23Q96B33 292 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 MYRFLQ96LU7 910 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 CYP2S1Q96SQ9 504 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 B3GNT5Q9BYG0 378 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 TRPV5Q9NQA5 729 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 FRMD4BQ9Y2L6 1034 aa18.91■□□□□ 0.62
PNKP-230ENST00000638016 C2orf78A6NCI8 922 aa18.9■□□□□ 0.62
PNKP-230ENST00000638016 PROB1E7EW31 1015 aa18.9■□□□□ 0.62
PNKP-230ENST00000638016 F8VP50 259 aa18.9■□□□□ 0.62
PNKP-230ENST00000638016 HLA-DRAP01903 254 aa18.9■□□□□ 0.62
PNKP-230ENST00000638016 GCLMP48507 274 aa18.9■□□□□ 0.62
PNKP-230ENST00000638016 VAMP7P51809 220 aa18.9■□□□□ 0.62
PNKP-230ENST00000638016 PPP3CAQ08209 521 aa18.9■□□□□ 0.62
PNKP-230ENST00000638016 ZNF667Q5HYK9 610 aa18.9■□□□□ 0.62
PNKP-230ENST00000638016 TSSK4Q6SA08 328 aa18.9■□□□□ 0.62
PNKP-230ENST00000638016 B3GALNT2Q8NCR0 500 aa18.9■□□□□ 0.62
PNKP-230ENST00000638016 CSGALNACT1Q8TDX6 532 aa18.9■□□□□ 0.62
PNKP-230ENST00000638016 TRMT2BQ96GJ1 504 aaKnown RBP18.9■□□□□ 0.62
PNKP-230ENST00000638016 OSBPL6Q9BZF3 934 aa18.9■□□□□ 0.62
PNKP-230ENST00000638016 VRTNQ9H8Y1 702 aa18.9■□□□□ 0.62
PNKP-230ENST00000638016 RBM12Q9NTZ6 932 aaKnown RBP18.9■□□□□ 0.62
PNKP-230ENST00000638016 PRR23AA6NEV1 266 aa18.89■□□□□ 0.61
PNKP-230ENST00000638016 OTOL1A6NHN0 477 aaPredicted RBP18.89■□□□□ 0.61
PNKP-230ENST00000638016 WEE1P30291 646 aa18.89■□□□□ 0.61
PNKP-230ENST00000638016 AVPR1AP37288 418 aa18.89■□□□□ 0.61
PNKP-230ENST00000638016 PIK3CAP42336 1068 aa18.89■□□□□ 0.61
PNKP-230ENST00000638016 KPNA1P52294 538 aaPredicted RBP18.89■□□□□ 0.61
PNKP-230ENST00000638016 MTAPQ13126 283 aa18.89■□□□□ 0.61
PNKP-230ENST00000638016 MAPRE1Q15691 268 aaKnown RBP18.89■□□□□ 0.61
PNKP-230ENST00000638016 VSTM1Q6UX27 236 aa18.89■□□□□ 0.61
PNKP-230ENST00000638016 MON1AQ86VX9 555 aa18.89■□□□□ 0.61
PNKP-230ENST00000638016 FAM186BQ8IYM0 893 aa18.89■□□□□ 0.61
PNKP-230ENST00000638016 CELF5Q8N6W0 485 aaKnown RBP18.89■□□□□ 0.61
PNKP-230ENST00000638016 APOBEC3GQ9HC16 384 aaKnown RBP18.89■□□□□ 0.61
PNKP-230ENST00000638016 HPS4Q9NQG7 708 aa18.89■□□□□ 0.61
PNKP-230ENST00000638016 GKN1Q9NS71 199 aa18.89■□□□□ 0.61
PNKP-230ENST00000638016 OBP2AQ9NY56 170 aa18.89■□□□□ 0.61
PNKP-230ENST00000638016 ATG2BQ96BY7 2078 aa18.89■□□□□ 0.61
PNKP-230ENST00000638016 GPR179Q6PRD1 2367 aa18.89■□□□□ 0.61
PNKP-230ENST00000638016 HELZP42694 1942 aaKnown RBP18.88■□□□□ 0.61
PNKP-230ENST00000638016 GOLGA6L4A6NEF3 574 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 SPECC1L-ADORA2AF8WAN1 911 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 MAN2B1O00754 1011 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 ARSAP15289 507 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 CTHP32929 405 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 PRCPP42785 496 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 ASPAP45381 313 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 AP3M2P53677 418 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 PMS1P54277 932 aaKnown RBP18.88■□□□□ 0.61
PNKP-230ENST00000638016 IFRD2Q12894 506 aaPredicted RBP18.88■□□□□ 0.61
PNKP-230ENST00000638016 ADAM9Q13443 819 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 GAS6Q14393 721 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 NFIL3Q16649 462 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 ARHGAP29Q52LW3 1261 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 NAIF1Q69YI7 327 aaPredicted RBP18.88■□□□□ 0.61
PNKP-230ENST00000638016 PAQR9Q6ZVX9 377 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 ARL14EPQ8N8R7 260 aaPredicted RBP18.88■□□□□ 0.61
PNKP-230ENST00000638016 TAS1R2Q8TE23 839 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 CHFRQ96EP1 664 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 SPATA17Q96L03 361 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 EBF3Q9H4W6 596 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 LMAN1LQ9HAT1 526 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 TDP1Q9NUW8 608 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 GCNT4Q9P109 453 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 UXTQ9UBK9 157 aaPredicted RBP18.88■□□□□ 0.61
PNKP-230ENST00000638016 MRPS17Q9Y2R5 130 aaKnown RBP18.88■□□□□ 0.61
PNKP-230ENST00000638016 PCDHA5Q9Y5H7 936 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 MYH10P35580 1976 aa18.88■□□□□ 0.61
PNKP-230ENST00000638016 CFAP54Q96N23 3096 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 LAMTOR5O43504 91 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 GADD45BO75293 160 aaPredicted RBP18.87■□□□□ 0.61
PNKP-230ENST00000638016 KIF20AO95235 890 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 ASS1P00966 412 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms