RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 ZBTB39O15060 712 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 MAD2L1Q13257 205 aaPredicted RBP20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 CCDC153Q494R4 210 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 PALB2Q86YC2 1186 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 MUC3BQ9H195 1237 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 ESPL1Q14674 2120 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 MPOP05164 745 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 RGS21Q2M5E4 152 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 KCTD1Q719H9 257 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 TRMT6Q9UJA5 497 aaKnown RBP20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 POLR1DQ9Y2S0 133 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 ACADSBP45954 432 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 TUBA3CQ13748 450 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 STK33Q9BYT3 514 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 ERVV-2B6SEH9 535 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 FAM58BPP0C7Q3 252 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 SLC22A9Q8IVM8 553 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 CLHC1Q8NHS4 586 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 GPR63Q9BZJ6 419 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 WWOXQ9NZC7 414 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 EMC3Q9P0I2 261 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 SYNMO15061 1565 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 LRRC14BA6NHZ5 514 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 CAMK2GQ13555 558 aaPredicted RBP20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 EIF2S3LQ2VIR3 472 aaKnown RBP20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 SPATA18Q8TC71 538 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 ZBTB10Q96DT7 871 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 NUAK2Q9H093 628 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 RIBC2Q9H4K1 309 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 PCMTD2Q9NV79 361 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 CRNNQ9UBG3 495 aaPredicted RBP20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 BNIPLQ7Z465 357 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 CCNJLQ8IV13 435 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 LNPEPQ9UIQ6 1025 aa20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 VIRMAQ69YN4 1812 aaKnown RBP20.02■□□□□ 0.8
CACNA1A-257ENST00000638009 FASP25445 335 aa20.02■□□□□ 0.79
CACNA1A-257ENST00000638009 KPNA1P52294 538 aaPredicted RBP20.02■□□□□ 0.79
CACNA1A-257ENST00000638009 MDH1BQ5I0G3 518 aa20.02■□□□□ 0.79
CACNA1A-257ENST00000638009 MFSD4BQ5TF39 518 aa20.02■□□□□ 0.79
CACNA1A-257ENST00000638009 C11orf57Q6ZUT1 292 aaPredicted RBP20.02■□□□□ 0.79
CACNA1A-257ENST00000638009 PFDN2Q9UHV9 154 aa20.02■□□□□ 0.79
CACNA1A-257ENST00000638009 LRCH1Q9Y2L9 728 aa20.02■□□□□ 0.79
CACNA1A-257ENST00000638009 RBBP8NLQ8NC74 664 aaPredicted RBP20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 ZNF671Q8TAW3 534 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 ATP9BO43861 1147 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 HSF2Q03933 536 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 SEL1L3Q68CR1 1132 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 TTC27Q6P3X3 843 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 FAM20AQ96MK3 541 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 Q96MT0 163 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 SYNDIG1Q9H7V2 258 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 C8orf4Q9NR00 106 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 A0A087X0T9 212 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 IGF2BP3O00425 579 aaKnown RBP eCLIP20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 LYNP07948 512 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 TRAF2Q12933 501 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 POMGNT2Q8NAT1 580 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 SNIP1Q8TAD8 396 aaKnown RBP20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 NR3C2P08235 984 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 IFNAR1P17181 557 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 TTLL4Q14679 1199 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 VN1R5Q7Z5H4 357 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 DCAF4Q8WV16 495 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 COPRSQ9NQ92 184 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 SLC2A3P11169 496 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 GRIK1P39086 918 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 CYP24A1Q07973 514 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 LPIN1Q14693 890 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 ZNF804BA4D1E1 1349 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 CCNG1P51959 295 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 ZNF846Q147U1 533 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 LRRC41Q15345 812 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 BNC2Q6ZN30 1099 aaPredicted RBP20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 FAM220AQ7Z4H9 259 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 CHPFQ8IZ52 775 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 RSAD1Q9HA92 442 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 OTUD4Q01804 1114 aaKnown RBP20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 BTKQ06187 659 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 NAPEPLDQ6IQ20 393 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 MSANTD1Q6ZTZ1 278 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 AMER2Q8N7J2 671 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 NOD2Q9HC29 1040 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 RNF123Q5XPI4 1314 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 ADGRF5Q8IZF2 1346 aa20.01■□□□□ 0.79
CACNA1A-257ENST00000638009 LIFRP42702 1097 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 EFNA5P52803 228 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 DDX17Q92841 729 aaKnown RBP20■□□□□ 0.79
CACNA1A-257ENST00000638009 OSBPL5Q9H0X9 879 aaPredicted RBP20■□□□□ 0.79
CACNA1A-257ENST00000638009 IL1RL2Q9HB29 575 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 ERBB4Q15303 1308 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 NPY2RP49146 381 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 OLFML2AQ68BL7 652 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 SLC9A6Q92581 669 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 DGCR14Q96DF8 476 aaKnown RBP20■□□□□ 0.79
CACNA1A-257ENST00000638009 KLHL1Q9NR64 748 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 ANXA9O76027 345 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 E2F7Q96AV8 911 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 FAM83BQ5T0W9 1011 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 PEX5LQ8IYB4 626 aa20■□□□□ 0.79
CACNA1A-257ENST00000638009 UGT2B28Q9BY64 529 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms