RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 SPATA17Q96L03 361 aa19.76■□□□□ 0.75
CLN6-220ENST00000637450 TRPC7Q9HCX4 862 aa19.76■□□□□ 0.75
CLN6-220ENST00000637450 GCNT4Q9P109 453 aa19.76■□□□□ 0.75
CLN6-220ENST00000637450 TRAV19A0A0A6YYK7 116 aa19.75■□□□□ 0.75
CLN6-220ENST00000637450 PDGFRBP09619 1106 aa19.75■□□□□ 0.75
CLN6-220ENST00000637450 GALK1P51570 392 aa19.75■□□□□ 0.75
CLN6-220ENST00000637450 PSMC1P62191 440 aaKnown RBP19.75■□□□□ 0.75
CLN6-220ENST00000637450 SNRPFP62306 86 aaKnown RBP19.75■□□□□ 0.75
CLN6-220ENST00000637450 MTF1Q14872 753 aa19.75■□□□□ 0.75
CLN6-220ENST00000637450 MAPRE1Q15691 268 aaKnown RBP19.75■□□□□ 0.75
CLN6-220ENST00000637450 ZNF77Q15935 545 aa19.75■□□□□ 0.75
CLN6-220ENST00000637450 UNC13DQ70J99 1090 aa19.75■□□□□ 0.75
CLN6-220ENST00000637450 FSIP1Q8NA03 581 aa19.75■□□□□ 0.75
CLN6-220ENST00000637450 OSCP1Q8WVF1 389 aa19.75■□□□□ 0.75
CLN6-220ENST00000637450 SCFD1Q8WVM8 642 aa19.75■□□□□ 0.75
CLN6-220ENST00000637450 SNX21Q969T3 373 aa19.75■□□□□ 0.75
CLN6-220ENST00000637450 MYLPFQ96A32 169 aa19.75■□□□□ 0.75
CLN6-220ENST00000637450 CEP295NLQ96MC4 621 aa19.75■□□□□ 0.75
CLN6-220ENST00000637450 MMS19Q96T76 1030 aa19.75■□□□□ 0.75
CLN6-220ENST00000637450 ECT2Q9H8V3 914 aa19.75■□□□□ 0.75
CLN6-220ENST00000637450 MAGEF1Q9HAY2 307 aa19.75■□□□□ 0.75
CLN6-220ENST00000637450 FBRSL1Q9HCM7 1045 aaKnown RBP19.75■□□□□ 0.75
CLN6-220ENST00000637450 CLIC2O15247 247 aa19.74■□□□□ 0.75
CLN6-220ENST00000637450 POLR2DO15514 142 aaKnown RBP19.74■□□□□ 0.75
CLN6-220ENST00000637450 ATG13O75143 517 aa19.74■□□□□ 0.75
CLN6-220ENST00000637450 FAM163BP0C2L3 166 aa19.74■□□□□ 0.75
CLN6-220ENST00000637450 DLATP10515 647 aaKnown RBP19.74■□□□□ 0.75
CLN6-220ENST00000637450 TNNI1P19237 187 aa19.74■□□□□ 0.75
CLN6-220ENST00000637450 BDNFP23560 247 aa19.74■□□□□ 0.75
CLN6-220ENST00000637450 GJA4P35212 333 aa19.74■□□□□ 0.75
CLN6-220ENST00000637450 CYP24A1Q07973 514 aa19.74■□□□□ 0.75
CLN6-220ENST00000637450 PSMD6Q15008 389 aa19.74■□□□□ 0.75
CLN6-220ENST00000637450 ARL14EPQ8N8R7 260 aaPredicted RBP19.74■□□□□ 0.75
CLN6-220ENST00000637450 FNBP1Q96RU3 617 aa19.74■□□□□ 0.75
CLN6-220ENST00000637450 CGRRF1Q99675 332 aa19.74■□□□□ 0.75
CLN6-220ENST00000637450 DUS2Q9NX74 493 aaKnown RBP19.74■□□□□ 0.75
CLN6-220ENST00000637450 CDV3Q9UKY7 258 aaKnown RBP19.74■□□□□ 0.75
CLN6-220ENST00000637450 UBE4BO95155 1302 aa19.74■□□□□ 0.75
CLN6-220ENST00000637450 C2orf78A6NCI8 922 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 TACC1O75410 805 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 EGFP01133 1207 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 CKMP06732 381 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 PDIA4P13667 645 aaKnown RBP19.73■□□□□ 0.75
CLN6-220ENST00000637450 DRD1P21728 446 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 CASP1P29466 404 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 GNL1P36915 607 aaPredicted RBP19.73■□□□□ 0.75
CLN6-220ENST00000637450 GRIK1P39086 918 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 CYP2J2P51589 502 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 USP4Q13107 963 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 FOXD4L5Q5VV16 416 aaPredicted RBP19.73■□□□□ 0.75
CLN6-220ENST00000637450 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.73■□□□□ 0.75
CLN6-220ENST00000637450 NELFCDQ8IXH7 590 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 CPA6Q8N4T0 437 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 XXYLT1Q8NBI6 393 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 MYCBPAPQ8TBZ2 947 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 FOXD4L4Q8WXT5 416 aaPredicted RBP19.73■□□□□ 0.75
CLN6-220ENST00000637450 CCDC127Q96BQ5 260 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 P2RY13Q9BPV8 354 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 MRPL45Q9BRJ2 306 aaKnown RBP19.73■□□□□ 0.75
CLN6-220ENST00000637450 RTKNQ9BST9 563 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 SEMA4GQ9NTN9 838 aa19.73■□□□□ 0.75
CLN6-220ENST00000637450 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.73■□□□□ 0.75
CLN6-220ENST00000637450 CCDC163A0A0D9SF12 145 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 PVALEFA0A1B0GWK0 134 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 ZSCAN22P10073 491 aaPredicted RBP19.72■□□□□ 0.75
CLN6-220ENST00000637450 TCF3P15923 654 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 HDCP19113 662 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 USP46P62068 366 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 CYP27A1Q02318 531 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 CSRP2Q16527 193 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 EML3Q32P44 896 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 NAIF1Q69YI7 327 aaPredicted RBP19.72■□□□□ 0.75
CLN6-220ENST00000637450 DENND5BQ6ZUT9 1274 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 CEP68Q76N32 757 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 HS2ST1Q7LGA3 356 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 FAM160A2Q8N612 972 aaPredicted RBP19.72■□□□□ 0.75
CLN6-220ENST00000637450 SH3RF2Q8TEC5 729 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 ZNF516Q92618 1163 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 ATP2A3Q93084 1043 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 EXOC4Q96A65 974 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 PCED1BQ96HM7 432 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 GZF1Q9H116 711 aaPredicted RBP19.72■□□□□ 0.75
CLN6-220ENST00000637450 BLZF1Q9H2G9 400 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 SNX25Q9H3E2 840 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 CGNQ9P2M7 1197 aaKnown RBP19.72■□□□□ 0.75
CLN6-220ENST00000637450 PCDHA7Q9UN72 937 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 ARHGAP26Q9UNA1 814 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 SLC8A2Q9UPR5 921 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 NME7Q9Y5B8 376 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 WNT6Q9Y6F9 365 aa19.72■□□□□ 0.75
CLN6-220ENST00000637450 KIF26AQ9ULI4 1882 aaPredicted RBP19.71■□□□□ 0.75
CLN6-220ENST00000637450 DENND4CQ5VZ89 1909 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 RNF40O75150 1001 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 PFKLP17858 780 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 IFNAR2P48551 515 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 PXNP49023 591 aaPredicted RBP19.71■□□□□ 0.75
CLN6-220ENST00000637450 KCNB1Q14721 858 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 BMT2Q1RMZ1 405 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 WDR72Q3MJ13 1102 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 FOXD4L6Q3SYB3 417 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms