RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 BCO2Q9BYV7 579 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 GTPBP4Q9BZE4 634 aaKnown RBP14.72□□□□□ -0.05
PNKP-228ENST00000637325 SMG9Q9H0W8 520 aaKnown RBP14.72□□□□□ -0.05
PNKP-228ENST00000637325 DPEP3Q9H4B8 488 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 LTB4R2Q9NPC1 389 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 THG1LQ9NWX6 298 aaKnown RBP14.72□□□□□ -0.05
PNKP-228ENST00000637325 OBP2AQ9NY56 170 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 PCDHA5Q9Y5H7 936 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 ATP8B3O60423 1300 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 SOBPA7XYQ1 873 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 LRRN2O75325 713 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 HLA-DRAP01903 254 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 TRIM49P0CI25 452 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 TRIM49CP0CI26 452 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 EPB41P11171 864 aaKnown RBP14.71□□□□□ -0.05
PNKP-228ENST00000637325 TRIM21P19474 475 aaKnown RBP14.71□□□□□ -0.05
PNKP-228ENST00000637325 HOXD11P31277 338 aaPredicted RBP14.71□□□□□ -0.05
PNKP-228ENST00000637325 PRCPP42785 496 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 GCLMP48507 274 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 MRE11P49959 708 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 KPNA1P52294 538 aaPredicted RBP14.71□□□□□ -0.05
PNKP-228ENST00000637325 ARHGAP29Q52LW3 1261 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 TXNDC8Q6A555 127 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 TMEM150AQ86TG1 271 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 MON1AQ86VX9 555 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 B3GALNT2Q8NCR0 500 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 CCDC150Q8NCX0 1101 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 BPIFB1Q8TDL5 484 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 ERCC4Q92889 916 aaPredicted RBP14.71□□□□□ -0.05
PNKP-228ENST00000637325 ELMO3Q96BJ8 720 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 TRMT2BQ96GJ1 504 aaKnown RBP14.71□□□□□ -0.05
PNKP-228ENST00000637325 TNIP3Q96KP6 325 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 SPATA17Q96L03 361 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 PHOX2BQ99453 314 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 MED10Q9BTT4 135 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 OSBPL6Q9BZF3 934 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 IMPG2Q9BZV3 1241 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 ELOVL4Q9GZR5 314 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 TRPC7Q9HCX4 862 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 TRPV5Q9NQA5 729 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.71□□□□□ -0.052e-7■■■■■ 93.2
PNKP-228ENST00000637325 EHD2Q9NZN4 543 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 MTF2Q9Y483 593 aaPredicted RBP14.71□□□□□ -0.05
PNKP-228ENST00000637325 NME7Q9Y5B8 376 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 COL4A2P08572 1712 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 FANCMQ8IYD8 2048 aa14.71□□□□□ -0.05
PNKP-228ENST00000637325 PTPRZ1P23471 2315 aaPredicted RBP14.71□□□□□ -0.05
PNKP-228ENST00000637325 PATJQ8NI35 1801 aa14.71□□□□□ -0.06
PNKP-228ENST00000637325 NCANO14594 1321 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 PRAMEF12O95522 483 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 MAGEA9P43362 315 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 PLCB2Q00722 1185 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 ENPEPQ07075 957 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 FCHO2Q0JRZ9 810 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 STIM1Q13586 685 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 ZCWPW2Q504Y3 356 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 C1orf220Q5T0J3 134 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 SPOPLQ6IQ16 392 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 DENND5BQ6ZUT9 1274 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 FAM3CQ92520 227 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 MYRFLQ96LU7 910 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 CEP295NLQ96MC4 621 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 B3GNT5Q9BYG0 378 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 SPATA6Q9NWH7 488 aaPredicted RBP14.7□□□□□ -0.06
PNKP-228ENST00000637325 NDRG2Q9UN36 371 aaKnown RBP14.7□□□□□ -0.06
PNKP-228ENST00000637325 PIAS3Q9Y6X2 628 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 MYOFQ9NZM1 2061 aa14.7□□□□□ -0.06
PNKP-228ENST00000637325 RIF1Q5UIP0 2472 aaKnown RBP14.69□□□□□ -0.06
PNKP-228ENST00000637325 TRAV19A0A0A6YYK7 116 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 F8VP50 259 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 CLDN5O00501 218 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 STX10O60499 249 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 ASS1P00966 412 aaKnown RBP14.69□□□□□ -0.06
PNKP-228ENST00000637325 GLULP15104 373 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 TARSP26639 723 aaKnown RBP14.69□□□□□ -0.06
PNKP-228ENST00000637325 GTF2H1P32780 548 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 PPP3CAQ08209 521 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 ISM2Q6H9L7 571 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 CC2D1AQ6P1N0 951 aaPredicted RBP14.69□□□□□ -0.06
PNKP-228ENST00000637325 C1orf210Q8IVY1 113 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 ELOA2Q8IYF1 753 aaPredicted RBP14.69□□□□□ -0.06
PNKP-228ENST00000637325 EEF2KMTQ96G04 330 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 ZFYVE19Q96K21 471 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 C8orf48Q96LL4 319 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 LRRC3BQ96PB8 259 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 ZNF518BQ9C0D4 1074 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 SDCBP2Q9H190 292 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 C8orf33Q9H7E9 229 aaPredicted RBP14.69□□□□□ -0.06
PNKP-228ENST00000637325 KIF9Q9HAQ2 790 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 TMEM8AQ9HCN3 771 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 TDP1Q9NUW8 608 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 TRPM5Q9NZQ8 1165 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 DLGAP2Q9P1A6 1054 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 MYO16Q9Y6X6 1858 aa14.69□□□□□ -0.06
PNKP-228ENST00000637325 FAM186AA6NE01 2351 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 GADD45BO75293 160 aaPredicted RBP14.68□□□□□ -0.06
PNKP-228ENST00000637325 TADA3O75528 432 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 CKMP06732 381 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 USP17L7P0C7H9 530 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 CCNE1P24864 410 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms