RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 PPP1R37O75864 691 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 TPM2P07951 284 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 SKILP12757 684 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.25
CTSD-208ENST00000636843 GAP43P17677 238 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 DDX6P26196 483 aaKnown RBP eCLIP13.52□□□□□ -0.25
CTSD-208ENST00000636843 CASP1P29466 404 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 ADSSP30520 456 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 CCZ1BP86790 482 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 CCZ1P86791 482 aaPredicted RBP13.52□□□□□ -0.25
CTSD-208ENST00000636843 AMPD3Q01432 767 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 TSPY1Q01534 308 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 SPEM2Q0P670 501 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 CCINQ13939 588 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 PON2Q15165 354 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 LPAL2Q16609 132 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 WDR44Q5JSH3 913 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 Q6ZS52 159 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 DYMQ7RTS9 669 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 EFCAB13Q8IY85 973 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 CMTM8Q8IZV2 173 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 TTC8Q8TAM2 541 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 STRA6Q9BX79 667 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 SLC46A2Q9BY10 475 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 BLZF1Q9H2G9 400 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 KCND1Q9NSA2 647 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 ABI2Q9NYB9 513 aaPredicted RBP13.52□□□□□ -0.25
CTSD-208ENST00000636843 RWDD2AQ9UIY3 292 aa13.52□□□□□ -0.25
CTSD-208ENST00000636843 R3HCC1Q9Y3T6 440 aaKnown RBP13.52□□□□□ -0.25
CTSD-208ENST00000636843 PPP1R2P41236 205 aa13.51□□□□□ -0.25
CTSD-208ENST00000636843 TNK2Q07912 1038 aa13.51□□□□□ -0.25
CTSD-208ENST00000636843 DMWDQ09019 674 aa13.51□□□□□ -0.25
CTSD-208ENST00000636843 NFE2Q16621 373 aaPredicted RBP13.51□□□□□ -0.25
CTSD-208ENST00000636843 SV2BQ7L1I2 683 aa13.51□□□□□ -0.25
CTSD-208ENST00000636843 C17orf53Q8N3J3 647 aaPredicted RBP13.51□□□□□ -0.25
CTSD-208ENST00000636843 CCDC112Q8NEF3 446 aa13.51□□□□□ -0.25
CTSD-208ENST00000636843 ACCSQ96QU6 501 aa13.51□□□□□ -0.25
CTSD-208ENST00000636843 MED15Q96RN5 788 aa13.51□□□□□ -0.25
CTSD-208ENST00000636843 MRPL44Q9H9J2 332 aaKnown RBP13.51□□□□□ -0.25
CTSD-208ENST00000636843 GKN1Q9NS71 199 aa13.51□□□□□ -0.25
CTSD-208ENST00000636843 SCN1AP35498 2009 aa13.51□□□□□ -0.25
CTSD-208ENST00000636843 FOXD2O60548 495 aaPredicted RBP13.5□□□□□ -0.25
CTSD-208ENST00000636843 RHOBTB3O94955 611 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 LDHAP00338 332 aaKnown RBP13.5□□□□□ -0.25
CTSD-208ENST00000636843 F11P03951 625 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 CSH1P0DML2 217 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 CSH2P0DML3 217 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 HMGA1P17096 107 aaKnown RBP13.5□□□□□ -0.25
CTSD-208ENST00000636843 AVPR1AP37288 418 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 PAK1Q13153 545 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 STIM1Q13586 685 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 TPD52L1Q16890 204 aaPredicted RBP13.5□□□□□ -0.25
CTSD-208ENST00000636843 CDKAL1Q5VV42 579 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 KLHL10Q6JEL2 608 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 WDR5BQ86VZ2 330 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 BRSK2Q8IWQ3 736 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 NETO1Q8TDF5 533 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 DNAJC19Q96DA6 116 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 C7orf25Q9BPX7 421 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 FAM83CQ9BQN1 747 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 FAM213AQ9BRX8 229 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 KIF9Q9HAQ2 790 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 SAMSN1Q9NSI8 373 aaKnown RBP13.5□□□□□ -0.25
CTSD-208ENST00000636843 PCDHB13Q9Y5F0 798 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 NUP210Q8TEM1 1887 aaPredicted RBP13.5□□□□□ -0.25
CTSD-208ENST00000636843 SPTBN2O15020 2390 aa13.5□□□□□ -0.25
CTSD-208ENST00000636843 MYMKA6NI61 221 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 HUS1O60921 280 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 GARTP22102 1010 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 CDR1P51861 262 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 TFAMQ00059 246 aaKnown RBP13.49□□□□□ -0.25
CTSD-208ENST00000636843 AMPD2Q01433 879 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 BFSP1Q12934 665 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 ALCAMQ13740 583 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 RUNX3Q13761 415 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 ARID5BQ14865 1188 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 CSRP2Q16527 193 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 FILIP1LQ4L180 1135 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 HEATR6Q6AI08 1181 aaKnown RBP13.49□□□□□ -0.25
CTSD-208ENST00000636843 CEP68Q76N32 757 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 TMEM150AQ86TG1 271 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 TMEM86AQ8N2M4 240 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 PDCL2Q8N4E4 241 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 MAB21L3Q8N8X9 362 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 SPATA18Q8TC71 538 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 MRPS31Q92665 395 aaKnown RBP13.49□□□□□ -0.25
CTSD-208ENST00000636843 ACBD6Q9BR61 282 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 LRRC27Q9C0I9 530 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 SMG9Q9H0W8 520 aaKnown RBP13.49□□□□□ -0.25
CTSD-208ENST00000636843 IKZF4Q9H2S9 585 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 ABCB6Q9NP58 842 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 OLFML3Q9NRN5 406 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 SEMA4GQ9NTN9 838 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 TDP1Q9NUW8 608 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 UXTQ9UBK9 157 aaPredicted RBP13.49□□□□□ -0.25
CTSD-208ENST00000636843 AGAP1Q9UPQ3 857 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 CTNND2Q9UQB3 1225 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.49□□□□□ -0.25
CTSD-208ENST00000636843 TSC2P49815 1807 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 A0A1B0GTH6 734 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms