RNA–Protein interactions for RNA: ENST00000636422.1

ARID1A-213, Transcript of AT-rich interaction domain 1A, human

TSL 5

Gene ARID1A, Length 1,324 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-213	ENST00000636422	AP3M2	P53677	418 aa		13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	MLLT6	P55198	1093 aa	Predicted RBP	13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	PSMC1	P62191	440 aa	Known RBP	13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	NUCB2	P80303	420 aa		13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	CYP4F8	P98187	520 aa		13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	ENPEP	Q07075	957 aa		13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	COBLL1	Q53SF7	1204 aa		13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	GPR158	Q5T848	1215 aa		13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	TPRG1	Q6ZUI0	275 aa		13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	GIPC2	Q8TF65	315 aa		13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	IRF7	Q92985	503 aa		13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	SYAP1	Q96A49	352 aa	Predicted RBP	13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	CEP295NL	Q96MC4	621 aa		13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	TRMT61B	Q9BVS5	477 aa	Known RBP	13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	SLITRK6	Q9H5Y7	841 aa		13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	HEBP1	Q9NRV9	189 aa		13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	TMEM30A	Q9NV96	361 aa		13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	SIT1	Q9Y3P8	196 aa		13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	MTF2	Q9Y483	593 aa	Predicted RBP	13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	ANAPC1	Q9H1A4	1944 aa		13.91	□□□□□ -0.18
ARID1A-213	ENST00000636422	SOBP	A7XYQ1	873 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	CHAD	O15335	359 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	AKAP3	O75969	853 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	DCN	P07585	359 aa	Known RBP	13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	CSH1	P0DML2	217 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	CSH2	P0DML3	217 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	DDX6	P26196	483 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	RPL10A	P62906	217 aa	Known RBP	13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	DLG4	P78352	724 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	ANGPT1	Q15389	498 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	MAPRE1	Q15691	268 aa	Known RBP	13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	SDHAF4	Q5VUM1	108 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	VSTM1	Q6UX27	236 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	RIN3	Q8TB24	985 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	PCED1B	Q96HM7	432 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	TTLL2	Q9BWV7	592 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	SLC46A2	Q9BY10	475 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	ATXN3L	Q9H3M9	355 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	BRD9	Q9H8M2	597 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	ZNF292	O60281	2723 aa		13.9	□□□□□ -0.18
ARID1A-213	ENST00000636422	IKBKB	O14920	756 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	KIF20A	O95235	890 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	ASS1	P00966	412 aa	Known RBP	13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	GDI1	P31150	447 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	MAGEA9	P43362	315 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	RPS9	P46781	194 aa	Known RBP	13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	FAM160A1	Q05DH4	1040 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	NCOA4	Q13772	614 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	DDR2	Q16832	855 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	EDRF1	Q3B7T1	1238 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	WDR72	Q3MJ13	1102 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	ARHGAP15	Q53QZ3	475 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	WDR44	Q5JSH3	913 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	C4orf50	Q6ZRC1	276 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	SV2A	Q7L0J3	742 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	ALYREF	Q86V81	257 aa	Known RBP	13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	CMTM8	Q8IZV2	173 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	MYCBPAP	Q8TBZ2	947 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	MSANTD3	Q96H12	275 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	SPATA17	Q96L03	361 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	SDCBP2	Q9H190	292 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	DPEP3	Q9H4B8	488 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	SMYD3	Q9H7B4	428 aa		13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	UXT	Q9UBK9	157 aa	Predicted RBP	13.9	□□□□□ -0.19
ARID1A-213	ENST00000636422	HELZ	P42694	1942 aa	Known RBP	13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	SLC38A8	A6NNN8	435 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	CD72	P21854	359 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	NR2F2	P24468	414 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	CACNA2D1	P54289	1103 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	TNNC1	P63316	161 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	USP4	Q13107	963 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	PNOC	Q13519	176 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	ZNF268	Q14587	947 aa	Predicted RBP	13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	ZNF699	Q32M78	642 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	MON1A	Q86VX9	555 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	B3GALNT2	Q8NCR0	500 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	FAM200A	Q8TCP9	573 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	USP13	Q92995	863 aa	Predicted RBP	13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	GCNA	Q96QF7	691 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	MMS19	Q96T76	1030 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	KIF9	Q9HAQ2	790 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	PRMT8	Q9NR22	394 aa	Predicted RBP	13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	CCL26	Q9Y258	94 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	PIAS3	Q9Y6X2	628 aa		13.89	□□□□□ -0.19
ARID1A-213	ENST00000636422	WDR87	Q6ZQQ6	2873 aa		13.88	□□□□□ -0.19
ARID1A-213	ENST00000636422	ZNF263	O14978	683 aa		13.88	□□□□□ -0.19
ARID1A-213	ENST00000636422	CALU	O43852	315 aa	Predicted RBP	13.88	□□□□□ -0.19
ARID1A-213	ENST00000636422	RFX1	P22670	979 aa		13.88	□□□□□ -0.19
ARID1A-213	ENST00000636422	BDNF	P23560	247 aa		13.88	□□□□□ -0.19
ARID1A-213	ENST00000636422	ASPA	P45381	313 aa		13.88	□□□□□ -0.19
ARID1A-213	ENST00000636422	NOP14	P78316	857 aa	Known RBP	13.88	□□□□□ -0.19
ARID1A-213	ENST00000636422	BIRC3	Q13489	604 aa		13.88	□□□□□ -0.19
ARID1A-213	ENST00000636422	ARHGAP29	Q52LW3	1261 aa		13.88	□□□□□ -0.19
ARID1A-213	ENST00000636422	MDH1B	Q5I0G3	518 aa		13.88	□□□□□ -0.19
ARID1A-213	ENST00000636422	ZNF852	Q6ZMS4	543 aa		13.88	□□□□□ -0.19
ARID1A-213	ENST00000636422	INTS8	Q75QN2	995 aa	Known RBP	13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms