RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ATP2C2O75185 946 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 TACC1O75410 805 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 FAM163BP0C2L3 166 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 USP17L7P0C7H9 530 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 CHRNB1P11230 501 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 BDNFP23560 247 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 LMO2P25791 158 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 ATICP31939 592 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 SYKP43405 635 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 TNK2Q07912 1038 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 ZNF268Q14587 947 aaPredicted RBP19.14■□□□□ 0.65
PNKP-225ENST00000636214 KCNB1Q14721 858 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 PON2Q15165 354 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 KMT5BQ4FZB7 885 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 MDH1BQ5I0G3 518 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 MAMSTRQ6ZN01 415 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 TMEM150AQ86TG1 271 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 SPEM1Q8N4L4 309 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 USP13Q92995 863 aaPredicted RBP19.14■□□□□ 0.65
PNKP-225ENST00000636214 CCDC34Q96HJ3 373 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 MYRFLQ96LU7 910 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 CEP295NLQ96MC4 621 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 NXF1Q9UBU9 619 aaKnown RBP19.14■□□□□ 0.65
PNKP-225ENST00000636214 CST3P01034 146 aaPredicted RBP19.13■□□□□ 0.65
PNKP-225ENST00000636214 FAM160A1Q05DH4 1040 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 RUNX3Q13761 415 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 PDGFRLQ15198 375 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 CCDC142Q17RM4 750 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 ZNF699Q32M78 642 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 DENND5BQ6ZUT9 1274 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 LIMS2Q7Z4I7 341 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 ZNF687Q8N1G0 1237 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 ZBTB44Q8NCP5 570 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 MYCBPAPQ8TBZ2 947 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 SPATA17Q96L03 361 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 MRPL45Q9BRJ2 306 aaKnown RBP19.13■□□□□ 0.65
PNKP-225ENST00000636214 SCAND2PQ9GZW5 306 aaPredicted RBP19.13■□□□□ 0.65
PNKP-225ENST00000636214 CRTAC1Q9NQ79 661 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 RBM12Q9NTZ6 932 aaKnown RBP19.13■□□□□ 0.65
PNKP-225ENST00000636214 TRPM5Q9NZQ8 1165 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 CCL26Q9Y258 94 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 FRMD4BQ9Y2L6 1034 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 ATP8B3O60423 1300 aa19.13■□□□□ 0.65
PNKP-225ENST00000636214 KIF26AQ9ULI4 1882 aaPredicted RBP19.13■□□□□ 0.65
PNKP-225ENST00000636214 A8MXQ7 604 aa19.12■□□□□ 0.65
PNKP-225ENST00000636214 CALUO43852 315 aaPredicted RBP19.12■□□□□ 0.65
PNKP-225ENST00000636214 KLRC4O43908 158 aa19.12■□□□□ 0.65
PNKP-225ENST00000636214 STAU1O95793 577 aaKnown RBP19.12■□□□□ 0.65
PNKP-225ENST00000636214 P4HA1P13674 534 aa19.12■□□□□ 0.65
PNKP-225ENST00000636214 IFNAR2P48551 515 aa19.12■□□□□ 0.65
PNKP-225ENST00000636214 MYL6P60660 151 aa19.12■□□□□ 0.65
PNKP-225ENST00000636214 GRSF1Q12849 480 aaKnown RBP eCLIP19.12■□□□□ 0.65
PNKP-225ENST00000636214 STK4Q13043 487 aa19.12■□□□□ 0.65
PNKP-225ENST00000636214 ZNF667Q5HYK9 610 aa19.12■□□□□ 0.65
PNKP-225ENST00000636214 TXNDC11Q6PKC3 985 aa19.12■□□□□ 0.65
PNKP-225ENST00000636214 KIAA2013Q8IYS2 634 aa19.12■□□□□ 0.65
PNKP-225ENST00000636214 SYNPOQ8N3V7 929 aa19.12■□□□□ 0.65
PNKP-225ENST00000636214 CPA6Q8N4T0 437 aa19.12■□□□□ 0.65
PNKP-225ENST00000636214 PCED1BQ96HM7 432 aa19.12■□□□□ 0.65
PNKP-225ENST00000636214 EBF3Q9H4W6 596 aa19.12■□□□□ 0.65
PNKP-225ENST00000636214 GMEB2Q9UKD1 530 aa19.12■□□□□ 0.65
PNKP-225ENST00000636214 SMG5Q9UPR3 1016 aaKnown RBP19.12■□□□□ 0.65
PNKP-225ENST00000636214 PDXKO00764 312 aa19.11■□□□□ 0.65
PNKP-225ENST00000636214 TADA3O75528 432 aa19.11■□□□□ 0.65
PNKP-225ENST00000636214 PTPN1P18031 435 aaKnown RBP19.11■□□□□ 0.65
PNKP-225ENST00000636214 TRIM21P19474 475 aaKnown RBP19.11■□□□□ 0.65
PNKP-225ENST00000636214 ID4P47928 161 aa19.11■□□□□ 0.65
PNKP-225ENST00000636214 CASP4P49662 377 aa19.11■□□□□ 0.65
PNKP-225ENST00000636214 MTF1Q14872 753 aa19.11■□□□□ 0.65
PNKP-225ENST00000636214 SUMF1Q8NBK3 374 aa19.11■□□□□ 0.65
PNKP-225ENST00000636214 KIAA0895Q8NCT3 520 aa19.11■□□□□ 0.65
PNKP-225ENST00000636214 FAM83CQ9BQN1 747 aa19.11■□□□□ 0.65
PNKP-225ENST00000636214 ELOVL4Q9GZR5 314 aa19.11■□□□□ 0.65
PNKP-225ENST00000636214 DUS2Q9NX74 493 aaKnown RBP19.11■□□□□ 0.65
PNKP-225ENST00000636214 PTPRDP23468 1912 aa19.11■□□□□ 0.65
PNKP-225ENST00000636214 F8VP50 259 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 NR3C1P04150 777 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 RPN1P04843 607 aaKnown RBP19.1■□□□□ 0.65
PNKP-225ENST00000636214 HDCP19113 662 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 SATB1Q01826 763 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 NCOA4Q13772 614 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 CEP135Q66GS9 1140 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 TRIM68Q6AZZ1 485 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 SLC9A9Q8IVB4 645 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 ARL14EPQ8N8R7 260 aaPredicted RBP19.1■□□□□ 0.65
PNKP-225ENST00000636214 PARD3BQ8TEW8 1205 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 ZNF516Q92618 1163 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 NELL1Q92832 810 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 ATP2A3Q93084 1043 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 TNIP3Q96KP6 325 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 EPC1Q9H2F5 836 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 HPSEQ9Y251 543 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 GREB1Q4ZG55 1949 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 ANAPC1Q9H1A4 1944 aa19.1■□□□□ 0.65
PNKP-225ENST00000636214 FRYLO94915 3013 aa19.09■□□□□ 0.65
PNKP-225ENST00000636214 LRRIQ3A6PVS8 624 aaPredicted RBP19.09■□□□□ 0.65
PNKP-225ENST00000636214 LILRB5O75023 590 aa19.09■□□□□ 0.65
PNKP-225ENST00000636214 ABL1P00519 1130 aa19.09■□□□□ 0.65
PNKP-225ENST00000636214 PFKLP17858 780 aa19.09■□□□□ 0.65
PNKP-225ENST00000636214 PPP3CCP48454 512 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms