RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 ATRIPQ8WXE1 791 aa20.23■□□□□ 0.83
CLN6-213ENST00000636212 ZFYVE19Q96K21 471 aa20.23■□□□□ 0.83
CLN6-213ENST00000636212 SPATA17Q96L03 361 aa20.23■□□□□ 0.83
CLN6-213ENST00000636212 CHRDQ9H2X0 955 aa20.23■□□□□ 0.83
CLN6-213ENST00000636212 CRTAC1Q9NQ79 661 aa20.23■□□□□ 0.83
CLN6-213ENST00000636212 ATP8B3O60423 1300 aa20.23■□□□□ 0.83
CLN6-213ENST00000636212 CACNA1HO95180 2353 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 TRAV19A0A0A6YYK7 116 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 ZNF202O95125 648 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 CKMP06732 381 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 PTPN1P18031 435 aaKnown RBP20.22■□□□□ 0.83
CLN6-213ENST00000636212 RPL13P26373 211 aaKnown RBP20.22■□□□□ 0.83
CLN6-213ENST00000636212 NUCB2P80303 420 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 AMPD2Q01433 879 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 MTAPQ13126 283 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 NCOA4Q13772 614 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 ZNF268Q14587 947 aaPredicted RBP20.22■□□□□ 0.83
CLN6-213ENST00000636212 CCDC142Q17RM4 750 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 TDRD10Q5VZ19 366 aaKnown RBP20.22■□□□□ 0.83
CLN6-213ENST00000636212 DENND5BQ6ZUT9 1274 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 TMC2Q8TDI7 906 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 EXOC4Q96A65 974 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 PCED1BQ96HM7 432 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 LRRC3BQ96PB8 259 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 ELOVL4Q9GZR5 314 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 VRTNQ9H8Y1 702 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 GKN1Q9NS71 199 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 GTSE1Q9NYZ3 720 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 TRAF3IP3Q9Y228 551 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 PCDHGA2Q9Y5H1 932 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 COL4A2P08572 1712 aa20.22■□□□□ 0.83
CLN6-213ENST00000636212 PATJQ8NI35 1801 aa20.21■□□□□ 0.83
CLN6-213ENST00000636212 SHISA7A6NL88 538 aa20.21■□□□□ 0.83
CLN6-213ENST00000636212 CTHP32929 405 aa20.21■□□□□ 0.83
CLN6-213ENST00000636212 CCR3P51677 355 aa20.21■□□□□ 0.83
CLN6-213ENST00000636212 NRLP54845 237 aa20.21■□□□□ 0.83
CLN6-213ENST00000636212 CLDN10P78369 228 aa20.21■□□□□ 0.83
CLN6-213ENST00000636212 DPYDQ12882 1025 aa20.21■□□□□ 0.83
CLN6-213ENST00000636212 FZD5Q13467 585 aa20.21■□□□□ 0.83
CLN6-213ENST00000636212 KCNB1Q14721 858 aa20.21■□□□□ 0.83
CLN6-213ENST00000636212 SGSM1Q2NKQ1 1148 aa20.21■□□□□ 0.83
CLN6-213ENST00000636212 DGKKQ5KSL6 1271 aa20.21■□□□□ 0.83
CLN6-213ENST00000636212 MAML2Q8IZL2 1156 aaPredicted RBP20.21■□□□□ 0.83
CLN6-213ENST00000636212 USP13Q92995 863 aaPredicted RBP20.21■□□□□ 0.83
CLN6-213ENST00000636212 TNIP3Q96KP6 325 aa20.21■□□□□ 0.83
CLN6-213ENST00000636212 FAM126AQ9BYI3 521 aaPredicted RBP20.21■□□□□ 0.83
CLN6-213ENST00000636212 ZSCAN32Q9NX65 697 aa20.21■□□□□ 0.83
CLN6-213ENST00000636212 TRPM5Q9NZQ8 1165 aa20.21■□□□□ 0.83
CLN6-213ENST00000636212 IKBKBO14920 756 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 MAPK13O15264 365 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 C4BPAP04003 597 aaKnown RBP20.2■□□□□ 0.82
CLN6-213ENST00000636212 PRR29P0C7W0 189 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 KRT13P13646 458 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 NR2F2P24468 414 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 SOX9P48436 509 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 PPP3CCP48454 512 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 FAM160A1Q05DH4 1040 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 RUNX3Q13761 415 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 MAMSTRQ6ZN01 415 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 B3GALNT2Q8NCR0 500 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 TTC16Q8NEE8 873 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 PLEKHO2Q8TD55 490 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 TAF4BQ92750 862 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 C8orf48Q96LL4 319 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 HINFPQ9BQA5 517 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 IMPG2Q9BZV3 1241 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 GZF1Q9H116 711 aaPredicted RBP20.2■□□□□ 0.82
CLN6-213ENST00000636212 XYLT2Q9H1B5 865 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 GDPD2Q9HCC8 539 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 RMND1Q9NWS8 449 aa20.2■□□□□ 0.82
CLN6-213ENST00000636212 CHRNB1P11230 501 aa20.19■□□□□ 0.82
CLN6-213ENST00000636212 PFKLP17858 780 aa20.19■□□□□ 0.82
CLN6-213ENST00000636212 VAMP7P51809 220 aa20.19■□□□□ 0.82
CLN6-213ENST00000636212 TNK2Q07912 1038 aa20.19■□□□□ 0.82
CLN6-213ENST00000636212 PDGFRLQ15198 375 aa20.19■□□□□ 0.82
CLN6-213ENST00000636212 NFIL3Q16649 462 aa20.19■□□□□ 0.82
CLN6-213ENST00000636212 SCARA5Q6ZMJ2 495 aa20.19■□□□□ 0.82
CLN6-213ENST00000636212 INTS8Q75QN2 995 aaKnown RBP20.19■□□□□ 0.82
CLN6-213ENST00000636212 ZNF687Q8N1G0 1237 aa20.19■□□□□ 0.82
CLN6-213ENST00000636212 GUF1Q8N442 669 aaKnown RBP20.19■□□□□ 0.82
CLN6-213ENST00000636212 MED10Q9BTT4 135 aa20.19■□□□□ 0.82
CLN6-213ENST00000636212 DNAI2Q9GZS0 605 aa20.19■□□□□ 0.82
CLN6-213ENST00000636212 GOLPH3LQ9H4A5 285 aa20.19■□□□□ 0.82
CLN6-213ENST00000636212 SMYD3Q9H7B4 428 aa20.19■□□□□ 0.82
CLN6-213ENST00000636212 PRMT8Q9NR22 394 aaPredicted RBP20.19■□□□□ 0.82
CLN6-213ENST00000636212 MAPK8IP1Q9UQF2 711 aa20.19■□□□□ 0.82
CLN6-213ENST00000636212 CCL26Q9Y258 94 aa20.19■□□□□ 0.82
CLN6-213ENST00000636212 F8VP50 259 aa20.18■□□□□ 0.82
CLN6-213ENST00000636212 TADA3O75528 432 aa20.18■□□□□ 0.82
CLN6-213ENST00000636212 HDCP19113 662 aa20.18■□□□□ 0.82
CLN6-213ENST00000636212 PSMC2P35998 433 aaKnown RBP20.18■□□□□ 0.82
CLN6-213ENST00000636212 PIK3CAP42336 1068 aa20.18■□□□□ 0.82
CLN6-213ENST00000636212 CXCL12P48061 93 aa20.18■□□□□ 0.82
CLN6-213ENST00000636212 IFNAR2P48551 515 aa20.18■□□□□ 0.82
CLN6-213ENST00000636212 MTF1Q14872 753 aa20.18■□□□□ 0.82
CLN6-213ENST00000636212 PON2Q15165 354 aa20.18■□□□□ 0.82
CLN6-213ENST00000636212 ZACNQ401N2 412 aa20.18■□□□□ 0.82
CLN6-213ENST00000636212 SYNPOQ8N3V7 929 aa20.18■□□□□ 0.82
CLN6-213ENST00000636212 SPEM1Q8N4L4 309 aa20.18■□□□□ 0.82
CLN6-213ENST00000636212 CCDC150Q8NCX0 1101 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms