RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 PCMTD2Q9NV79 361 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 STARD13Q9Y3M8 1113 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 N6AMT1Q9Y5N5 214 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 XDHP47989 1333 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 GAS2O43903 313 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SRGAP2O75044 1071 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 RHOBTB3O94955 611 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 FCER1AP12319 257 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 FAUP35544 74 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 AKR1D1P51857 326 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 RGS1Q08116 209 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 CBX3Q13185 183 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PTPROQ16827 1216 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PFKFB3Q16875 520 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SLC27A3Q5K4L6 730 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ALKBH5Q6P6C2 394 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PROM2Q8N271 834 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ZNF671Q8TAW3 534 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 MAGEE2Q8TD90 523 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ACOT12Q8WYK0 555 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 AP3S1Q92572 193 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SUCLG2Q96I99 432 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 CCDC115Q96NT0 180 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 CRLS1Q9UJA2 301 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SMG5Q9UPR3 1016 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 FGD5Q6ZNL6 1462 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 AKAP6Q13023 2319 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 A0A1W2PQ72 361 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 BTBD19C9JJ37 291 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 RGS14O43566 566 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 MFAP3LO75121 409 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SIN3BO75182 1162 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PLEKHA8P1O95397 391 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 P4HBP07237 508 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PCSK1P29120 753 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ETFBP38117 255 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 RESTQ13127 1097 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 TIMM50Q3ZCQ8 353 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ZNF772Q68DY9 489 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 C1orf94Q6P1W5 598 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SLC13A5Q86YT5 568 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 NLGN1Q8N2Q7 840 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 GPD1LQ8N335 351 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SMYD1Q8NB12 490 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 WNT8AQ9H1J5 351 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PRKAG3Q9UGI9 489 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 GPN3Q9UHW5 284 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PACSIN3Q9UKS6 424 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 USP18Q9UMW8 372 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 MYO3BQ8WXR4 1341 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 CFAP43Q8NDM7 1665 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 DOCK9Q9BZ29 2069 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 TMEM114B3SHH9 223 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ATP9BO43861 1147 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ZNF862O60290 1169 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SPAG6O75602 509 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 CD2BP2O95400 341 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 HSMCR30P0CW71 290 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 TCF4P15884 667 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ITGB6P18564 788 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 TRIP10Q15642 601 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ZNHIT3Q15649 155 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 RSBN1Q5VWQ0 802 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 C4orf22Q6V702 233 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 GPR141Q7Z602 305 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SUGP1Q8IWZ8 645 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PPP1R36Q96LQ0 422 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 TMEM68Q96MH6 324 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 CATSPER2Q96P56 530 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SIK2Q9H0K1 926 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 POLR1BQ9H9Y6 1135 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 KLF15Q9UIH9 416 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 LINC00854A0A1B0GVQ3 168 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 BCLAF3A2AJT9 711 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 AVILO75366 819 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SFNP31947 248 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 HPCAL1P37235 193 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ACSM2AQ08AH3 577 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 STILQ15468 1287 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 DUOXA2Q1HG44 320 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SWI5Q1ZZU3 235 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 HSDL1Q3SXM5 330 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 DUS1LQ6P1R4 473 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 TAF2Q6P1X5 1199 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 OR52L1Q8NGH7 329 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 JARID2Q92833 1246 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PHB2Q99623 299 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 METTL22Q9BUU2 404 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PHF20Q9BVI0 1012 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 IDI2Q9BXS1 227 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 RAD54BQ9Y620 910 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 NCKAP5LQ9HCH0 1330 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 RPAP1Q9BWH6 1393 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PFASO15067 1338 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 SLC27A2O14975 620 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PEX14O75381 377 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 NR3C2P08235 984 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 CHMLP26374 656 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PGM1P36871 562 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 DCAF6Q58WW2 860 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms