RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 GSCP56915 257 aaPredicted RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 LINC01547P58512 204 aaPredicted RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 ETF1P62495 437 aaKnown RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 VLDLRP98155 873 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 ATP2C1P98194 919 aaPredicted RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 MS4A2Q01362 244 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 NHLH2Q02577 135 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 CFHR3Q02985 330 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 ZNF33BQ06732 778 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 PPIDQ08752 370 aaKnown RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 DHX34Q14147 1143 aaKnown RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 BMS1Q14692 1282 aaKnown RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 PTGR1Q14914 329 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 ACAP1Q15027 740 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 EIF4HQ15056 248 aaKnown RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 QPCTQ16769 361 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 KCTD19Q17RG1 926 aaPredicted RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 ZFP69Q49AA0 526 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 HIGD2BQ4VC39 106 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 PLEKHO1Q53GL0 409 aaPredicted RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 AARS2Q5JTZ9 985 aaKnown RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 MEX3CQ5U5Q3 659 aaKnown RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 AGBL2Q5U5Z8 902 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 OLFML2AQ68BL7 652 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 CEP85Q6P2H3 762 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 ZNF613Q6PF04 617 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 LRIG3Q6UXM1 1119 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 IL17RELQ6ZVW7 336 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 PLPPR4Q7Z2D5 763 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 ADCK1Q86TW2 530 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 TMEM25Q86YD3 366 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 THNSL2Q86YJ6 484 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 GID4Q8IVV7 300 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 YAF2Q8IY57 180 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 NAGSQ8N159 534 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 PRSS35Q8N3Z0 413 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 CAMKK1Q8N5S9 505 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 MAB21L3Q8N8X9 362 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 CNBD1Q8NA66 436 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 ZSCAN4Q8NAM6 433 aaPredicted RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 TSEN2Q8NCE0 465 aaKnown RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 CLEC18CQ8NCF0 446 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 B3GALNT2Q8NCR0 500 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 RGS22Q8NE09 1264 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 MARCH1Q8TCQ1 289 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 EPS8L1Q8TE68 723 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 SEC14L1Q92503 715 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 PEX13Q92968 403 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 ELMO3Q96BJ8 720 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 SIPA1Q96FS4 1042 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 BICD1Q96G01 975 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 FBXL20Q96IG2 436 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 C18orf15Q96N68 181 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 GPHA2Q96T91 129 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 NPAS1Q99742 590 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 PKP2Q99959 881 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 SOSTQ9BQB4 213 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 CPPED1Q9BRF8 314 aaPredicted RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 MTA3Q9BTC8 594 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 C2orf49Q9BVC5 232 aaPredicted RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 GTPBP2Q9BX10 602 aaKnown RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 TRIM55Q9BYV6 548 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 TRIM6Q9C030 488 aaPredicted RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 RAB33BQ9H082 229 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 OSBPL2Q9H1P3 480 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 GAREM1Q9H706 876 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 IFT122Q9HBG6 1241 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 MMP25Q9NPA2 562 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 IL23AQ9NPF7 189 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 LHX9Q9NQ69 397 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 GPRC5DQ9NZD1 345 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 CNTN3Q9P232 1028 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 DNAJB11Q9UBS4 358 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 RCAN3Q9UKA8 241 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 ZMYND8Q9ULU4 1186 aaPredicted RBP-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 PCDHA6Q9UN73 950 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 WIF1Q9Y5W5 379 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 RFNGQ9Y644 331 aa-0.82□□□□□ -2.54
CDKL5-210ENST00000636046 MXRA5Q9NR99 2828 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 WDR87Q6ZQQ6 2873 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 IGLV4-60A0A075B6I1 120 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 NBPF19A0A087WUL8 3843 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 GSAPA4D1B5 854 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 CFAP69A5D8W1 941 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 SH2B2O14492 632 aaPredicted RBP-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 TCERG1O14776 1098 aaKnown RBP-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 MAGEB2O15479 319 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 MYO1BO43795 1136 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 TMPRSS11DO60235 418 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 CEP104O60308 925 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 PPP1R11O60927 126 aaPredicted RBP-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 NDUFB8O95169 186 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 ATG7O95352 703 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 PRAMEF1O95521 474 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 TTLL1O95922 423 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 IL18BPO95998 194 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 ATP1A1P05023 1023 aaKnown RBP-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 CFIP05156 583 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 TUBBP07437 444 aa-0.83□□□□□ -2.54
CDKL5-210ENST00000636046 MELTFP08582 738 aa-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms