RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 TRIM60Q495X7 471 aa14.97□□□□□ -0.01
NEDD4L-238ENST00000635997 CDKL3Q8IVW4 592 aaPredicted RBP14.97□□□□□ -0.01
NEDD4L-238ENST00000635997 KIAA0319LQ8IZA0 1049 aa14.97□□□□□ -0.01
NEDD4L-238ENST00000635997 GAD1Q99259 594 aa14.97□□□□□ -0.01
NEDD4L-238ENST00000635997 GTF3C4Q9UKN8 822 aa14.97□□□□□ -0.01
NEDD4L-238ENST00000635997 GPD1P21695 349 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 ST8SIA6P61647 398 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 HSDL1Q3SXM5 330 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 TMEM119Q4V9L6 283 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 TAF1BQ53T94 588 aaPredicted RBP14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 ACAD10Q6JQN1 1059 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 SNF8Q96H20 258 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 SYNDIG1Q9H7V2 258 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 CACNA1FO60840 1977 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 F8VZ95 297 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 GJB6O95452 261 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 SERPINB6P35237 376 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 KPNA1P52294 538 aaPredicted RBP14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 BYSLQ13895 437 aaKnown RBP14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 KRT33BQ14525 404 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 PPM1LQ5SGD2 360 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 FOXR1Q6PIV2 292 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 RCOR2Q8IZ40 523 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 HIPK4Q8NE63 616 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 TRPV6Q9H1D0 765 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 MRPL17Q9NRX2 175 aaKnown RBP14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 ZFATQ9P243 1243 aa14.96□□□□□ -0.01
NEDD4L-238ENST00000635997 TULP2O00295 520 aa14.96□□□□□ -0.02
NEDD4L-238ENST00000635997 EEF2KO00418 725 aaKnown RBP14.96□□□□□ -0.02
NEDD4L-238ENST00000635997 CD52P31358 61 aa14.96□□□□□ -0.02
NEDD4L-238ENST00000635997 CBWD6Q4V339 395 aa14.96□□□□□ -0.02
NEDD4L-238ENST00000635997 COBLL1Q53SF7 1204 aa14.96□□□□□ -0.02
NEDD4L-238ENST00000635997 CBWD3Q5JTY5 395 aa14.96□□□□□ -0.02
NEDD4L-238ENST00000635997 CBWD5Q5RIA9 395 aa14.96□□□□□ -0.02
NEDD4L-238ENST00000635997 FAM71DQ8N9W8 422 aa14.96□□□□□ -0.02
NEDD4L-238ENST00000635997 ZNF507Q8TCN5 953 aa14.96□□□□□ -0.02
NEDD4L-238ENST00000635997 KLHL29Q96CT2 875 aa14.96□□□□□ -0.02
NEDD4L-238ENST00000635997 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.96□□□□□ -0.02
NEDD4L-238ENST00000635997 CHMP2BQ9UQN3 213 aa14.96□□□□□ -0.02
NEDD4L-238ENST00000635997 A0A1W2PQJ5 194 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 SLC12A3P55017 1021 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 MAP3K7CLP57077 242 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 CORO7P57737 925 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 DLG4P78352 724 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 OCRLQ01968 901 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 TPCN2Q8NHX9 752 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 MORC4Q8TE76 937 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 CGRRF1Q99675 332 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 KCNMB3Q9NPA1 279 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 HACD3Q9P035 362 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 NUDT5Q9UKK9 219 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 FBXO47Q5MNV8 452 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 C1orf186Q6ZWK4 172 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 EPM2AIP1Q7L775 607 aaPredicted RBP14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 ATP11CQ8NB49 1132 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 RSAD1Q9HA92 442 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 FAM187AA6NFU0 413 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 PPP1R12AO14974 1030 aaPredicted RBP14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 CHUKO15111 745 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 HSPA4LO95757 839 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 FOSL2P15408 326 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 FAM171A1Q5VUB5 890 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 PALB2Q86YC2 1186 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 ARHGEF19Q8IW93 802 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 SLC25A41Q8N5S1 370 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 CEP120Q8N960 986 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 STKLD1Q8NE28 680 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 EDEM1Q92611 657 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 HHIPL1Q96JK4 782 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 DYRK4Q9NR20 520 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 SNRPFP62306 86 aaKnown RBP14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 MRPS6P82932 125 aaKnown RBP14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 PTPN11Q06124 597 aaPredicted RBP14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 TWF1Q12792 350 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 DDX53Q86TM3 631 aaKnown RBP14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 ADGRF2Q8IZF7 708 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 ASAP3Q8TDY4 903 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 IRAK4Q9NWZ3 460 aa14.95□□□□□ -0.02
NEDD4L-238ENST00000635997 GRID2IPA4D2P6 1211 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 HMGB1P1B2RPK0 211 aaPredicted RBP14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 ARVCFO00192 962 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 PAMP19021 973 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 ZNF280DQ6N043 979 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 JAMLQ86YT9 394 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 ZBTB10Q96DT7 871 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 SEZ6LQ9BYH1 1024 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 DNAJC18Q9H819 358 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 ACKR2O00590 384 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 MUTP22033 750 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 ECM1Q16610 540 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 UGCGQ16739 394 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 ATAT1Q5SQI0 421 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 IPMKQ8NFU5 416 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 ZNF606Q8WXB4 792 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 ZIC5Q96T25 663 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 INTS13Q9NVM9 706 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 PPARGC1AQ9UBK2 798 aaKnown RBP14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 CNTNAP1P78357 1384 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 PMPCBO75439 489 aa14.94□□□□□ -0.02
NEDD4L-238ENST00000635997 EN2P19622 333 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms