RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 TAL1P17542 331 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-210ENST00000635776 DPY19L2P1Q6NXN4 242 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 FAF2Q96CS3 445 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 MAGEB18Q96M61 343 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 SLITRK1Q96PX8 696 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 FDXACB1Q9BRP7 624 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-210ENST00000635776 ZNF670Q9BS34 389 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 FGFR1OP2Q9NVK5 253 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 BTBD7Q9P203 1132 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 RBPJLQ9UBG7 517 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 SNX9Q9Y5X1 595 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 TISP43B9A030 160 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 ALOX15BO15296 676 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 CHN1P15882 459 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 BRD2P25440 801 aaKnown RBP4.77□□□□□ -1.65
SCN1A-210ENST00000635776 CLCN3P51790 818 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 NUGGCQ68CJ6 796 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 MTHFD1LQ6UB35 978 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 FBXO16Q8IX29 292 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-210ENST00000635776 SLC4A11Q8NBS3 891 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 MED10Q9BTT4 135 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 TRIM55Q9BYV6 548 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 KDM4CQ9H3R0 1056 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 USH1CQ9Y6N9 552 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 PDHXO00330 501 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 LIASO43766 372 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 RGS20O76081 388 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 LMNAP02545 664 aaKnown RBP4.77□□□□□ -1.65
SCN1A-210ENST00000635776 ACO1P21399 889 aaKnown RBP4.77□□□□□ -1.65
SCN1A-210ENST00000635776 FBXO47Q5MNV8 452 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 CYP4F22Q6NT55 531 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 REM2Q8IYK8 340 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-210ENST00000635776 ZBED8Q8IZ13 594 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 ALLCQ8N6M5 410 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 CCDC110Q8TBZ0 833 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 USP6NLQ92738 828 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 TLCD1Q96CP7 247 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 PLEKHA4Q9H4M7 779 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 CCDC134Q9H6E4 229 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 IPO11Q9UI26 975 aaKnown RBP4.77□□□□□ -1.65
SCN1A-210ENST00000635776 RPL26L1Q9UNX3 145 aaKnown RBP4.77□□□□□ -1.65
SCN1A-210ENST00000635776 USP15Q9Y4E8 981 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-210ENST00000635776 RBM47A0AV96 593 aaKnown RBP4.77□□□□□ -1.65
SCN1A-210ENST00000635776 GPR182O15218 404 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 CABYRO75952 493 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 LY6KQ17RY6 165 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 TTMPQ5BVD1 217 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 MAP3K21Q5TCX8 1036 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 SPATA21Q7Z572 469 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 CTAGE3PQ8IX95 158 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 SMC1BQ8NDV3 1235 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 DDX1Q92499 740 aaKnown RBP4.77□□□□□ -1.65
SCN1A-210ENST00000635776 FAM149B1Q96BN6 582 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 ZDHHC18Q9NUE0 388 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 LGALS13Q9UHV8 139 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 UMODL1Q5DID0 1318 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 hCG_1818297A0A087WSY0 165 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 HOXD10P28358 340 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 ADORA2AP29274 412 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 PTGIRP43119 386 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 SLC6A3Q01959 620 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 ACVR2BQ13705 512 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 TBCCQ15814 346 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 KYNUQ16719 465 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 BBS9Q3SYG4 887 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 INTS6LQ5JSJ4 861 aaKnown RBP4.77□□□□□ -1.65
SCN1A-210ENST00000635776 DSTYKQ6XUX3 929 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 ARCQ7LC44 396 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 ANKS1BQ7Z6G8 1248 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 TOP6BLQ8N6T0 577 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 PPFIBP2Q8ND30 876 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 BFARQ9NZS9 450 aa4.77□□□□□ -1.65
SCN1A-210ENST00000635776 POC1B-GALNT4F8VUJ3 575 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 DPYSL4O14531 572 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 CHUKO15111 745 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 C22orf31O95567 290 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 FAM153BP0C7A2 387 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 HTR7P34969 479 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 IRX4P78413 519 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 TSPY1Q01534 308 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 GUCY1A3Q02108 690 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 TAF1CQ15572 869 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 FAM153CQ494X1 144 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 SLC39A4Q6P5W5 647 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 PPP4R1Q8TF05 950 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 RNF34Q969K3 372 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 FAM153AQ9UHL3 310 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 GON4LQ3T8J9 2241 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 PFDN6O15212 129 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 DYNC1LI2O43237 492 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 STBD1O95210 358 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 STAMBPO95630 424 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 AKR1A1P14550 325 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 MBTD1Q05BQ5 628 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 IFRD2Q12894 506 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-210ENST00000635776 UGP2Q16851 508 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 TREML2Q5T2D2 321 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 ERMARDQ5T6L9 678 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 ARHGAP17Q68EM7 881 aa4.76□□□□□ -1.65
SCN1A-210ENST00000635776 MAMDC4Q6UXC1 1216 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms