RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 CDH9Q9ULB4 789 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 SPAG17Q6Q759 2223 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 GREB1Q4ZG55 1949 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 K7ESF4 209 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 TGFB1I1O43294 461 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 HRO43593 1189 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 TADA3O75528 432 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 PAPSS2O95340 614 aaPredicted RBP13.49□□□□□ -0.25
PTPN11-206ENST00000635652 CST3P01034 146 aaPredicted RBP13.49□□□□□ -0.25
PTPN11-206ENST00000635652 USP17L7P0C7H9 530 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 ZSCAN22P10073 491 aaPredicted RBP13.49□□□□□ -0.25
PTPN11-206ENST00000635652 SDHBP21912 280 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 BDNFP23560 247 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 ANXA13P27216 316 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 CNR2P34972 360 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 GNL1P36915 607 aaPredicted RBP13.49□□□□□ -0.25
PTPN11-206ENST00000635652 GRIK1P39086 918 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 MAGEA11P43364 429 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 AFMP43652 599 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 SPEM2Q0P670 501 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 SRSF5Q13243 272 aaKnown RBP13.49□□□□□ -0.25
PTPN11-206ENST00000635652 ZNF268Q14587 947 aaPredicted RBP13.49□□□□□ -0.25
PTPN11-206ENST00000635652 PDGFRLQ15198 375 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 MAPRE1Q15691 268 aaKnown RBP13.49□□□□□ -0.25
PTPN11-206ENST00000635652 CNNM4Q6P4Q7 775 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 UNC13DQ70J99 1090 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 XXYLT1Q8NBI6 393 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 SCFD1Q8WVM8 642 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 KBTBD7Q8WVZ9 684 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 SNX21Q969T3 373 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 SLC22A12Q96S37 553 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 SNX25Q9H3E2 840 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 MAGEF1Q9HAY2 307 aa13.49□□□□□ -0.25
PTPN11-206ENST00000635652 LAMA1P25391 3075 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 UBE4BO95155 1302 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 PRR5-ARHGAP8B1AHC4 643 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 ATG13O75143 517 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 CLSTN1O94985 981 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 F13A1P00488 732 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 PDIA4P13667 645 aaKnown RBP13.48□□□□□ -0.25
PTPN11-206ENST00000635652 HDCP19113 662 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 WARSP23381 471 aaKnown RBP13.48□□□□□ -0.25
PTPN11-206ENST00000635652 HOXC13P31276 330 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 IFNAR2P48551 515 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 SNRPFP62306 86 aaKnown RBP13.48□□□□□ -0.25
PTPN11-206ENST00000635652 TNNC1P63316 161 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 ARHGAP8P85298 464 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 LMNB2Q03252 620 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 FAM160A1Q05DH4 1040 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 CYP24A1Q07973 514 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 TRPC3Q13507 836 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 CUL4BQ13620 913 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 KCNB1Q14721 858 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 MTF1Q14872 753 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 PSMD6Q15008 389 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 WDR72Q3MJ13 1102 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 TMEM196Q5HYL7 178 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 FSTL4Q6MZW2 842 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 VSTM1Q6UX27 236 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 CEP68Q76N32 757 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 LIMS2Q7Z4I7 341 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.48□□□□□ -0.25
PTPN11-206ENST00000635652 CPA6Q8N4T0 437 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 ARL14EPQ8N8R7 260 aaPredicted RBP13.48□□□□□ -0.25
PTPN11-206ENST00000635652 OR6B3Q8NGW1 331 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 RIN3Q8TB24 985 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 MYCBPAPQ8TBZ2 947 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 EXOC4Q96A65 974 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 CGRRF1Q99675 332 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 MRPL45Q9BRJ2 306 aaKnown RBP13.48□□□□□ -0.25
PTPN11-206ENST00000635652 SLC39A2Q9NP94 309 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 PARD6AQ9NPB6 346 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 CRTAC1Q9NQ79 661 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 DUS2Q9NX74 493 aaKnown RBP13.48□□□□□ -0.25
PTPN11-206ENST00000635652 CDV3Q9UKY7 258 aaKnown RBP13.48□□□□□ -0.25
PTPN11-206ENST00000635652 PCDHA7Q9UN72 937 aa13.48□□□□□ -0.25
PTPN11-206ENST00000635652 PTPRDP23468 1912 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 MED19A0JLT2 244 aaPredicted RBP13.47□□□□□ -0.25
PTPN11-206ENST00000635652 TRDMT1O14717 391 aaKnown RBP13.47□□□□□ -0.25
PTPN11-206ENST00000635652 EXOC3O60645 756 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 PHACTR2O75167 634 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 EGFP01133 1207 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 RETP07949 1114 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 TGM1P22735 817 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 GJA4P35212 333 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 PXNP49023 591 aaPredicted RBP13.47□□□□□ -0.25
PTPN11-206ENST00000635652 GALK1P51570 392 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 MDH1BQ5I0G3 518 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 DENND5BQ6ZUT9 1274 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 CEP57L1Q8IYX8 460 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 SPRYD3Q8NCJ5 442 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 OSCP1Q8WVF1 389 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 PCED1BQ96HM7 432 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 SPATA17Q96L03 361 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 ECT2Q9H8V3 914 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 FBRSL1Q9HCM7 1045 aaKnown RBP13.47□□□□□ -0.25
PTPN11-206ENST00000635652 EHD2Q9NZN4 543 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 TRPM5Q9NZQ8 1165 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 NXF1Q9UBU9 619 aaKnown RBP13.47□□□□□ -0.25
PTPN11-206ENST00000635652 CFAP45Q9UL16 551 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms