RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, human

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF4-208	ENST00000634348	MCUB	Q9NWR8	336 aa		11.77	□□□□□ -0.53
SRSF4-208	ENST00000634348	RGS17	Q9UGC6	210 aa	Predicted RBP	11.77	□□□□□ -0.53
SRSF4-208	ENST00000634348	RSL24D1	Q9UHA3	163 aa	Known RBP	11.77	□□□□□ -0.53
SRSF4-208	ENST00000634348	C2CD2	Q9Y426	696 aa		11.77	□□□□□ -0.53
SRSF4-208	ENST00000634348	DUOX2	Q9NRD8	1548 aa		11.77	□□□□□ -0.53
SRSF4-208	ENST00000634348	DENND3	A2RUS2	1198 aa		11.77	□□□□□ -0.53
SRSF4-208	ENST00000634348	STX11	O75558	287 aa		11.77	□□□□□ -0.53
SRSF4-208	ENST00000634348	ATP6V1G2	O95670	118 aa		11.77	□□□□□ -0.53
SRSF4-208	ENST00000634348	ANKRD40	Q6AI12	368 aa		11.77	□□□□□ -0.53
SRSF4-208	ENST00000634348	TTC27	Q6P3X3	843 aa		11.77	□□□□□ -0.53
SRSF4-208	ENST00000634348	KBTBD2	Q8IY47	623 aa		11.77	□□□□□ -0.53
SRSF4-208	ENST00000634348	SLITRK2	Q9H156	845 aa		11.77	□□□□□ -0.53
SRSF4-208	ENST00000634348	PCDHA6	Q9UN73	950 aa		11.77	□□□□□ -0.53
SRSF4-208	ENST00000634348	PCDHA8	Q9Y5H6	950 aa		11.77	□□□□□ -0.53
SRSF4-208	ENST00000634348	SMCO1	Q147U7	214 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	MTHFD1L	Q6UB35	978 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	SUGP1	Q8IWZ8	645 aa	Known RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	C12orf50	Q8NA57	414 aa	Predicted RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	GIPC3	Q8TF64	312 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	YME1L1	Q96TA2	773 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	SLC12A4	Q9UP95	1085 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	CLCA2	Q9UQC9	943 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	EPN2	O95208	641 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	ORC2	Q13416	577 aa	Predicted RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	RGS10	O43665	173 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	NR3C1	P04150	777 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	ARL3	P36405	182 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	RPS6KA3	P51812	740 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	GPC5	P78333	572 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	KCNT1	Q5JUK3	1230 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	SPAG16	Q8N0X2	631 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	CYP4Z2P	Q8N1L4	340 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	SSH2	Q76I76	1423 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	PNMA6F	A0A0J9YX94	578 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	PSIP1	O75475	530 aa	Known RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	TCF4	P15884	667 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	IRAK1	P51617	712 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	TYSND1	Q2T9J0	566 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	GATAD2B	Q8WXI9	593 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	MND1	Q9BWT6	205 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	ROGDI	Q9GZN7	287 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	BSDC1	Q9NW68	430 aa	Predicted RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	TEX33	O43247	280 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	TRIM3	O75382	744 aa	Predicted RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	DGKI	O75912	1065 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	IL12A	P29459	219 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	CBX3	Q13185	183 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	ZRANB3	Q5FWF4	1079 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	ELMO2	Q96JJ3	720 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	TDRD3	Q9H7E2	651 aa	Known RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	QTRT2	Q9H974	415 aa	Known RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	COPRS	Q9NQ92	184 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	KLHL1	Q9NR64	748 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	CEP72	Q9P209	647 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	CRNN	Q9UBG3	495 aa	Predicted RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	TMCC3	Q9ULS5	477 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	THEGL	P0DJG4	465 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	ALOX15	P16050	662 aa	Predicted RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	SRPK1	Q96SB4	655 aa	Known RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	OSBPL6	Q9BZF3	934 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	TUBB1	Q9H4B7	451 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	SP110	Q9HB58	689 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	ZNF304	Q9HCX3	659 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	IL5RA	Q01344	420 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	MAPK6	Q16659	721 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	HEATR6	Q6AI08	1181 aa	Known RBP	11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	ZBTB49	Q6ZSB9	765 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	PPCS	Q9HAB8	311 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	AMACR	Q9UHK6	382 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	ABCG2	Q9UNQ0	655 aa		11.76	□□□□□ -0.53
SRSF4-208	ENST00000634348	HMBS	P08397	361 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	GNA15	P30679	374 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	SWSAP1	Q6NVH7	229 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	THEM5	Q8N1Q8	247 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	SLC30A5	Q8TAD4	765 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	ASB12	Q8WXK4	309 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	SLC9A2	Q9UBY0	812 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	LEMD3	Q9Y2U8	911 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	RBMX2	Q9Y388	322 aa	Known RBP	11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	MYL2	P10916	166 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	DRAP1	Q14919	205 aa	Predicted RBP	11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	TIMM50	Q3ZCQ8	353 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	C4orf46	Q504U0	113 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	GAL3ST3	Q96A11	431 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	CYP39A1	Q9NYL5	469 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	ZHX2	Q9Y6X8	837 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	TPST1	O60507	370 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	RFC5	P40937	340 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	RAD23A	P54725	363 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	RAB42	Q8N4Z0	105 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	JADE3	Q92613	823 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	PIDD1	Q9HB75	910 aa		11.75	□□□□□ -0.53
SRSF4-208	ENST00000634348	ABCB10	Q9NRK6	738 aa		11.75	□□□□□ -0.53

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