RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-256	ENST00000630482	ZNF268	Q14587	947 aa	Predicted RBP	12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	CSRP2	Q16527	193 aa		12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	CFAP221	Q4G0U5	840 aa		12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	CC2D1A	Q6P1N0	951 aa	Predicted RBP	12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	KBTBD6	Q86V97	674 aa		12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	CCDC65	Q8IXS2	484 aa		12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	SYNPO	Q8N3V7	929 aa		12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	ARL14EP	Q8N8R7	260 aa	Predicted RBP	12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	DHX58	Q96C10	678 aa		12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	HPDL	Q96IR7	371 aa		12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	MYRFL	Q96LU7	910 aa		12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	SMOC1	Q9H4F8	434 aa		12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	TMEM206	Q9H813	350 aa		12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	ECT2	Q9H8V3	914 aa		12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	RXFP3	Q9NSD7	469 aa		12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	HSPBP1	Q9NZL4	362 aa		12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	GCNT4	Q9P109	453 aa		12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	TFIP11	Q9UBB9	837 aa	Known RBP	12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	UXT	Q9UBK9	157 aa	Predicted RBP	12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	ZMYM5	Q9UJ78	669 aa		12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.96	□□□□□ -0.33
SOX2-OT-256	ENST00000630482	TRAV19	A0A0A6YYK7	116 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SCAMP3	O14828	347 aa	Known RBP	12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	AXIN1	O15169	862 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	STX6	O43752	255 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	LRP3	O75074	770 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	PDGFRB	P09619	1106 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SDHB	P21912	280 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	BDNF	P23560	247 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	PCSK1	P29120	753 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	LHX1	P48742	406 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	GALK1	P51570	392 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ASIC1	P78348	528 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ZXDB	P98169	803 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	GRSF1	Q12849	480 aa	Known RBP eCLIP	12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SF3A2	Q15428	464 aa	Known RBP	12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	EML3	Q32P44	896 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	FAM171B	Q6P995	826 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	LIMS2	Q7Z4I7	341 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	RDH13	Q8NBN7	331 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	LINC00301	Q8NCQ3	95 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	RPLP0P6	Q8NHW5	317 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	NETO1	Q8TDF5	533 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SH3RF2	Q8TEC5	729 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	GAB3	Q8WWW8	586 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	P2RY13	Q9BPV8	354 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	MRPL45	Q9BRJ2	306 aa	Known RBP	12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	TRIM9	Q9C026	710 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ARRDC1-AS1	Q9H2J1	176 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	TNMD	Q9H2S6	317 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	TMEM30A	Q9NV96	361 aa		12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	DUS2	Q9NX74	493 aa	Known RBP	12.95	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ASCC3	Q8N3C0	2202 aa	Known RBP	12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ZNF233	A6NK53	670 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SLC30A4	O14863	429 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CLIC2	O15247	247 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	TGFB1I1	O43294	461 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	RPP40	O75818	363 aa	Known RBP	12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	TNNC2	P02585	160 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	USP17L7	P0C7H9	530 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CCDC192	P0DO97	292 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	HOXA6	P31267	233 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	IFNAR2	P48551	515 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CYP2J2	P51589	502 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CACNA2D1	P54289	1103 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CYP27A1	Q02318	531 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	MYO1E	Q12965	1108 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	PSMD2	Q13200	908 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	PDGFRL	Q15198	375 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	MDH1B	Q5I0G3	518 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	PPM1J	Q5JR12	505 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SHC4	Q6S5L8	630 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	EPM2AIP1	Q7L775	607 aa	Predicted RBP	12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	WDR49	Q8IV35	697 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	NELFCD	Q8IXH7	590 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CPA6	Q8N4T0	437 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SPATA18	Q8TC71	538 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	OSCP1	Q8WVF1	389 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ELMO3	Q96BJ8	720 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	PCED1B	Q96HM7	432 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	INTS4	Q96HW7	963 aa	Known RBP	12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	FUBP3	Q96I24	572 aa	Known RBP eCLIP	12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	GZF1	Q9H116	711 aa	Predicted RBP	12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	DPEP3	Q9H4B8	488 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	KBTBD4	Q9NVX7	518 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	MAGEC2	Q9UBF1	373 aa	Predicted RBP	12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CDH9	Q9ULB4	789 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SLC8A2	Q9UPR5	921 aa		12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	KMT2B	Q9UMN6	2715 aa	Predicted RBP	12.94	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	GON4L	Q3T8J9	2241 aa		12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482		K7ELQ4	463 aa	Predicted RBP	12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SPTLC2	O15270	562 aa		12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	EPN2	O95208	641 aa		12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CST3	P01034	146 aa	Predicted RBP	12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	DLAT	P10515	647 aa	Known RBP	12.93	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms