RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 CRY1Q16526 586 aa21.63■■□□□ 1.05
TARDBP-228ENST00000629725 TRIM61Q5EBN2 209 aa21.63■■□□□ 1.05
TARDBP-228ENST00000629725 ARL6IP4Q66PJ3 421 aaKnown RBP21.63■■□□□ 1.05
TARDBP-228ENST00000629725 MCTP1Q6DN14 999 aa21.63■■□□□ 1.05
TARDBP-228ENST00000629725 KIAA1211LQ6NV74 962 aa21.63■■□□□ 1.05
TARDBP-228ENST00000629725 TTC30AQ86WT1 665 aa21.63■■□□□ 1.05
TARDBP-228ENST00000629725 NT5DC4Q86YG4 428 aa21.63■■□□□ 1.05
TARDBP-228ENST00000629725 CALML4Q96GE6 196 aa21.63■■□□□ 1.05
TARDBP-228ENST00000629725 FIZ1Q96SL8 496 aa21.63■■□□□ 1.05
TARDBP-228ENST00000629725 NUSAP1Q9BXS6 441 aaKnown RBP21.63■■□□□ 1.05
TARDBP-228ENST00000629725 SLC32A1Q9H598 525 aa21.63■■□□□ 1.05
TARDBP-228ENST00000629725 GTF3C4Q9UKN8 822 aa21.63■■□□□ 1.05
TARDBP-228ENST00000629725 STYXL1Q9Y6J8 313 aa21.63■■□□□ 1.05
TARDBP-228ENST00000629725 C2orf78A6NCI8 922 aa21.62■■□□□ 1.05
TARDBP-228ENST00000629725 EIF5BO60841 1220 aaKnown RBP21.62■■□□□ 1.05
TARDBP-228ENST00000629725 ALDH1A2O94788 518 aa21.62■■□□□ 1.05
TARDBP-228ENST00000629725 ACAT1P24752 427 aaKnown RBP21.62■■□□□ 1.05
TARDBP-228ENST00000629725 OPRD1P41143 372 aa21.62■■□□□ 1.05
TARDBP-228ENST00000629725 MYL7Q01449 175 aa21.62■■□□□ 1.05
TARDBP-228ENST00000629725 ZC2HC1CQ53FD0 456 aaPredicted RBP21.62■■□□□ 1.05
TARDBP-228ENST00000629725 INTS6LQ5JSJ4 861 aaKnown RBP21.62■■□□□ 1.05
TARDBP-228ENST00000629725 CRELD2Q6UXH1 353 aaPredicted RBP21.62■■□□□ 1.05
TARDBP-228ENST00000629725 CCDC33Q8N5R6 958 aa21.62■■□□□ 1.05
TARDBP-228ENST00000629725 AK8Q96MA6 479 aa21.62■■□□□ 1.05
TARDBP-228ENST00000629725 GCNT4Q9P109 453 aa21.62■■□□□ 1.05
TARDBP-228ENST00000629725 L1RE1Q9UN81 338 aa21.62■■□□□ 1.05
TARDBP-228ENST00000629725 NEUROG3Q9Y4Z2 214 aa21.62■■□□□ 1.05
TARDBP-228ENST00000629725 LOC400499M0QZD8 3231 aa21.61■■□□□ 1.05
TARDBP-228ENST00000629725 SLC26A4O43511 780 aa21.61■■□□□ 1.05
TARDBP-228ENST00000629725 HYAL3O43820 417 aaPredicted RBP21.61■■□□□ 1.05
TARDBP-228ENST00000629725 HUS1O60921 280 aa21.61■■□□□ 1.05
TARDBP-228ENST00000629725 TBCAO75347 108 aaKnown RBP21.61■■□□□ 1.05
TARDBP-228ENST00000629725 IL18RAPO95256 599 aa21.61■■□□□ 1.05
TARDBP-228ENST00000629725 TCF3P15923 654 aa21.61■■□□□ 1.05
TARDBP-228ENST00000629725 HDCP19113 662 aa21.61■■□□□ 1.05
TARDBP-228ENST00000629725 CFAP221Q4G0U5 840 aa21.61■■□□□ 1.05
TARDBP-228ENST00000629725 LRSAM1Q6UWE0 723 aa21.61■■□□□ 1.05
TARDBP-228ENST00000629725 LPCAT2Q7L5N7 544 aa21.61■■□□□ 1.05
TARDBP-228ENST00000629725 TMEM86AQ8N2M4 240 aa21.61■■□□□ 1.05
TARDBP-228ENST00000629725 OLIG1Q8TAK6 271 aa21.61■■□□□ 1.05
TARDBP-228ENST00000629725 LRRC15Q8TF66 581 aa21.61■■□□□ 1.05
TARDBP-228ENST00000629725 POMGNT1Q8WZA1 660 aa21.61■■□□□ 1.05
TARDBP-228ENST00000629725 CIZ1Q9ULV3 898 aaPredicted RBP21.61■■□□□ 1.05
TARDBP-228ENST00000629725 ARHGAP26Q9UNA1 814 aa21.61■■□□□ 1.05
TARDBP-228ENST00000629725 ANTXRLA6NF34 631 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 TULP1O00294 542 aaPredicted RBP21.6■■□□□ 1.05
TARDBP-228ENST00000629725 MAP3K13O43283 966 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 ITGB3P05106 788 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 POLR2BP30876 1174 aaKnown RBP21.6■■□□□ 1.05
TARDBP-228ENST00000629725 UBA7P41226 1012 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 MAPK8P45983 427 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 PDE6CP51160 858 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 MRPS21P82921 87 aaKnown RBP21.6■■□□□ 1.05
TARDBP-228ENST00000629725 RING1Q06587 406 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 MCM6Q14566 821 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 SPATA2LQ8IUW3 424 aaPredicted RBP21.6■■□□□ 1.05
TARDBP-228ENST00000629725 SCN4BQ8IWT1 228 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 RLN3Q8WXF3 142 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 SPACA7Q96KW9 195 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 PKMYT1Q99640 499 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 BLOC1S4Q9NUP1 217 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 AGAP1Q9UPQ3 857 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 ITPR1Q14643 2758 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 GON4LQ3T8J9 2241 aa21.6■■□□□ 1.05
TARDBP-228ENST00000629725 SMG1Q96Q15 3661 aaKnown RBP21.59■■□□□ 1.05
TARDBP-228ENST00000629725 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 TNFRSF10BO14763 440 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 ENGP17813 658 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 P2RY2P41231 377 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 TFAMQ00059 246 aaKnown RBP21.59■■□□□ 1.05
TARDBP-228ENST00000629725 TMEM92Q6UXU6 159 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 ARMCX6Q7L4S7 300 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 SYT12Q8IV01 421 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 TMEFF1Q8IYR6 380 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 WHAMMQ8TF30 809 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 FUBP3Q96I24 572 aaKnown RBP eCLIP21.59■■□□□ 1.05
TARDBP-228ENST00000629725 FNBP1Q96RU3 617 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 ST6GALNAC4Q9H4F1 302 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 TMEM74BQ9NUR3 256 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 LHX6Q9UPM6 363 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 MSRB2Q9Y3D2 182 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 CEP192Q8TEP8 1941 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 ADAMTS9Q9P2N4 1935 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 PLXND1Q9Y4D7 1925 aa21.59■■□□□ 1.05
TARDBP-228ENST00000629725 ADSSP30520 456 aa21.58■■□□□ 1.05
TARDBP-228ENST00000629725 PTGER3P43115 390 aa21.58■■□□□ 1.05
TARDBP-228ENST00000629725 ZXDBP98169 803 aa21.58■■□□□ 1.05
TARDBP-228ENST00000629725 POSTNQ15063 836 aa21.58■■□□□ 1.05
TARDBP-228ENST00000629725 GAB4Q2WGN9 574 aa21.58■■□□□ 1.05
TARDBP-228ENST00000629725 LMBRD2Q68DH5 695 aaPredicted RBP21.58■■□□□ 1.05
TARDBP-228ENST00000629725 C1orf127Q8N9H9 656 aa21.58■■□□□ 1.05
TARDBP-228ENST00000629725 RAD54LQ92698 747 aa21.58■■□□□ 1.05
TARDBP-228ENST00000629725 IKZF4Q9H2S9 585 aa21.58■■□□□ 1.05
TARDBP-228ENST00000629725 KLK13Q9UKR3 277 aa21.58■■□□□ 1.05
TARDBP-228ENST00000629725 CACNA1EQ15878 2313 aa21.57■■□□□ 1.04
TARDBP-228ENST00000629725 MYMKA6NI61 221 aa21.57■■□□□ 1.04
TARDBP-228ENST00000629725 LEFTY2O00292 366 aa21.57■■□□□ 1.04
TARDBP-228ENST00000629725 HNRNPLP14866 589 aaKnown RBP eCLIP21.57■■□□□ 1.04
TARDBP-228ENST00000629725 PLCG1P19174 1290 aa21.57■■□□□ 1.04
TARDBP-228ENST00000629725 LHX1P48742 406 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms